RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 ZHX1Q9UKY1 873 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 CCPG1Q9ULG6 757 aa7.5□□□□□ -1.21
TMEM260-209ENST00000556079 CTDP1Q9Y5B0 961 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-209ENST00000556079 E7EWF7 191 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 HIP1O00291 1037 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ATP2A1O14983 1001 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 STRNO43815 780 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 PPP1R11O60927 126 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ADCYAP1R1P41586 468 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 MFAP1P55081 439 aaKnown RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 MMRN1Q13201 1228 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 LRRC41Q15345 812 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 SEC23AQ15436 765 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 IMMTQ16891 758 aaKnown RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ARMCX2Q7L311 632 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 FAM160B2Q86V87 743 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 FBXO16Q8IX29 292 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 CCDC144CPQ8IYA2 1237 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 TRMT44Q8IYL2 757 aaKnown RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ABRAQ8N0Z2 381 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ZNF687Q8N1G0 1237 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ANKRD35Q8N283 1001 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 PNMA1Q8ND90 353 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 PIBF1Q8WXW3 757 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ESR2Q92731 530 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 DDX11Q96FC9 970 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 TCEANC2Q96MN5 208 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 GUCD1Q96NT3 240 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 ESYT1Q9BSJ8 1104 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 MYL10Q9BUA6 226 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 LRRC2Q9BYS8 371 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 SENP6Q9GZR1 1112 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 KATNBL1Q9H079 304 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 RANBP17Q9H2T7 1088 aaKnown RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 VAT1LQ9HCJ6 419 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-209ENST00000556079 LHX6Q9UPM6 363 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 RAD50Q92878 1312 aa7.49□□□□□ -1.21
TMEM260-209ENST00000556079 SLC27A2O14975 620 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 SEPT4O43236 478 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 RXRAP19793 462 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 CALML3P27482 149 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 BEX3Q00994 111 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 BAATQ14032 418 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 CDC37Q16543 378 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 BTNL9Q6UXG8 535 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 CENPQQ7L2Z9 268 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 SH3RF1Q7Z6J0 888 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 MB21D2Q8IYB1 491 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 FAM133AQ8N9E0 248 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 RNF41Q9H4P4 317 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-209ENST00000556079 DOCK5Q9H7D0 1870 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 ACAD9Q9H845 621 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 KAT14Q9H8E8 782 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 COL20A1Q9P218 1284 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 SYNRGQ9UMZ2 1314 aa7.48□□□□□ -1.21
TMEM260-209ENST00000556079 PTPDC1A2A3K4 754 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 OPLAHO14841 1288 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 CTAGE5O15320 804 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 PLA2G6O60733 806 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 ADAMTS4O75173 837 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 ICAM1P05362 532 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 CPA1P15085 419 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 RTP1P59025 263 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 ACVR2BQ13705 512 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 QRICH1Q2TAL8 776 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 CCDC144BQ3MJ40 725 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 TRIM60Q495X7 471 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 TICAM2Q86XR7 235 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 ADGRF4Q8IZF3 695 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 CMTR1Q8N1G2 835 aaKnown RBP7.47□□□□□ -1.21
TMEM260-209ENST00000556079 CHST13Q8NET6 341 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 MAP4K1Q92918 833 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 JMJD4Q9H9V9 463 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 XPNPEP3Q9NQH7 507 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 MAD2L2Q9UI95 211 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 SYNPO2Q9UMS6 1093 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 ATP11BQ9Y2G3 1177 aa7.47□□□□□ -1.21
TMEM260-209ENST00000556079 hCG_1642624A0A1W2PR95 340 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 IFIT3O14879 490 aaKnown RBP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 DHX16O60231 1041 aaKnown RBP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 SORBS3O60504 671 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 SMPD1P17405 629 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 ITGB8P26012 769 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 OAZ1P54368 228 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 MAMDC4Q6UXC1 1216 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 DGKHQ86XP1 1220 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 ANKS1AQ92625 1134 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms