RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CDX2Q99626 313 aaPredicted RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 KRT23Q9C075 422 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 MTIF3Q9H2K0 278 aaKnown RBP9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 PDGFCQ9NRA1 345 aa9.13□□□□□ -0.95
PTCSC3-201ENST00000556013 PTPDC1A2A3K4 754 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 EPHB4P54760 987 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 HAND2P61296 217 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 RPS6P62753 249 aaKnown RBP9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 TRAF1Q13077 416 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 ASPRV1Q53RT3 343 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 TMEM240Q5SV17 173 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 CWC27Q6UX04 472 aaKnown RBP9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 CXCL17Q6UXB2 119 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 C16orf59Q7L2K0 433 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 PNMA1Q8ND90 353 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 SCFD2Q8WU76 684 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 HERVK_113Q902F9 699 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 IWS1Q96ST2 819 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 WDR11Q9BZH6 1224 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 IL23AQ9NPF7 189 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 DIAPH3Q9NSV4 1193 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 ZSWIM5Q9P217 1185 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
PTCSC3-201ENST00000556013 LAMA2P24043 3122 aaKnown RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 GRIN2DO15399 1336 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 ABCB11O95342 1321 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 A6NJR5 290 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 NFIBO00712 420 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 FGBP02675 491 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 PFKMP08237 780 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 SNAP25P60880 206 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 BEX3Q00994 111 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 TBC1D10CQ8IV04 446 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 ZSCAN10Q96SZ4 725 aaPredicted RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 TTYH1Q9H313 450 aaPredicted RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 KAT14Q9H8E8 782 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 MTMR7Q9Y216 660 aa9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 MRPL11Q9Y3B7 192 aaKnown RBP9.11□□□□□ -0.95
PTCSC3-201ENST00000556013 FRMPD2Q68DX3 1309 aaPredicted RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 RAD50Q92878 1312 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 KDM4AO75164 1064 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 CSF2RAP15509 400 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 DNAJB2P25686 324 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 CALML3P27482 149 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 PURAQ00577 322 aaKnown RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 GHRHRQ02643 423 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 PDE4DQ08499 809 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 NFRKBQ6P4R8 1299 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 ZNF365Q70YC5 407 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 FBXO16Q8IX29 292 aaPredicted RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 EXOC6Q8TAG9 804 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 NSUN6Q8TEA1 469 aaKnown RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 RUFY2Q8WXA3 655 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 MTG1Q9BT17 334 aaPredicted RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 ALDH8A1Q9H2A2 487 aaPredicted RBP9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 HIPK3Q9H422 1215 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 ZNF576Q9H609 170 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 MCM3APO60318 1980 aa9.1□□□□□ -0.95
PTCSC3-201ENST00000556013 B4E1Z4 1266 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 B4GALT4O60513 344 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 PARP1P09874 1014 aaKnown RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 TXNP10599 105 aaKnown RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 RFC2P35250 354 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 TRDNQ13061 729 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 RAB30Q15771 203 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 STXBP2Q15833 593 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 CCDC62Q6P9F0 684 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 KCNV1Q6PIU1 500 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 RASGRP2Q7LDG7 609 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 ADGRF4Q8IZF3 695 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 ENAHQ8N8S7 591 aaPredicted RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 SYTL5Q8TDW5 730 aaPredicted RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 CHMP4CQ96CF2 233 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 TIFAQ96CG3 184 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 MTMR8Q96EF0 704 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 FAM161BQ96MY7 647 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 UBAC1Q9BSL1 405 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 MTA3Q9BTC8 594 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 NOC4LQ9BVI4 516 aaKnown RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 UBA5Q9GZZ9 404 aa9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
PTCSC3-201ENST00000556013 NEDD4P46934 1319 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 PITPNM1O00562 1244 aa9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 PARNO95453 639 aaKnown RBP9.08□□□□□ -0.96
PTCSC3-201ENST00000556013 GOLGA8HP0CJ92 632 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms