RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	GBF1	Q92538	1859 aa		11.17	□□□□□ -0.62
PRKCH-215	ENST00000555382	KLF18	A0A0U1RQI7	1052 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	STRN	O43815	780 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	PFKFB2	O60825	505 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	PARP1	P09874	1014 aa	Known RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	BMP3	P12645	472 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	FAAP100	Q0VG06	881 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	KIAA1755	Q5JYT7	1200 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	PRAMEF19	Q5SWL8	479 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	WDR78	Q5VTH9	848 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	C16orf59	Q7L2K0	433 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	TEX2	Q8IWB9	1127 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	ABRA	Q8N0Z2	381 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	LRRC47	Q8N1G4	583 aa	Known RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	PRPF38A	Q8NAV1	312 aa	Known RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	CTCFL	Q8NI51	663 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	TIFA	Q96CG3	184 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	MAML3	Q96JK9	1138 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	SPZ1	Q9BXG8	430 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	LRRC2	Q9BYS8	371 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	MAF1	Q9H063	256 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	SPATC1L	Q9H0A9	340 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	HOXC10	Q9NYD6	342 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	MAD2L2	Q9UI95	211 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	TBX21	Q9UL17	535 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	TPCN1	Q9ULQ1	816 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	IVNS1ABP	Q9Y6Y0	642 aa		11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	COL11A1	P12107	1806 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKCH-215	ENST00000555382	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382		A0A1W2PQ45	241 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382		A0A1W2PQY0	241 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	ADAMTS4	O75173	837 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	ERCC3	P19447	782 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	PBX2	P40425	430 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	FPGS	Q05932	587 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	APOBR	Q0VD83	1088 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	COG2	Q14746	738 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	MB21D1	Q8N884	522 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	RGS22	Q8NE09	1264 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	MTMR8	Q96EF0	704 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	TOX2	Q96NM4	488 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	LLPH	Q9BRT6	129 aa	Known RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	PBX4	Q9BYU1	374 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	RIOX1	Q9H6W3	641 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	THEG	Q9P2T0	379 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	NRBP1	Q9UHY1	535 aa		11.15	□□□□□ -0.62
PRKCH-215	ENST00000555382	MUC6	Q6W4X9	2439 aa		11.15	□□□□□ -0.63
PRKCH-215	ENST00000555382	GOLGA8B	A8MQT2	603 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	KLRF2	D3W0D1	207 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	ATP2A1	O14983	1001 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	CDKL5	O76039	1030 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	IFNAR1	P17181	557 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	METAP2	P50579	478 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	STAT2	P52630	851 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	OAZ1	P54368	228 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	FUT2	Q10981	343 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	TRAF1	Q13077	416 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	ME3	Q16798	604 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	RTN1	Q16799	776 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	TMTC3	Q6ZXV5	915 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	GTF3C6	Q969F1	213 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	UHRF1	Q96T88	793 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	SLK	Q9H2G2	1235 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	CWC22	Q9HCG8	908 aa	Known RBP	11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	PPP1R9A	Q9ULJ8	1098 aa		11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.14	□□□□□ -0.63
PRKCH-215	ENST00000555382	WDFY4	Q6ZS81	3184 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	TAL1	P17542	331 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	DSG3	P32926	999 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	CUL4A	Q13619	759 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	NTRK3	Q16288	839 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	TMEM240	Q5SV17	173 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	FAM83B	Q5T0W9	1011 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	CPLX2	Q6PUV4	134 aa	Known RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	DPP9	Q86TI2	863 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	MICU3	Q86XE3	530 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	LENG1	Q96BZ8	264 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	FAM122A	Q96E09	287 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	INTS4	Q96HW7	963 aa	Known RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	SLF1	Q9BQI6	1058 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	PRDM12	Q9H4Q4	367 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	XPNPEP3	Q9NQH7	507 aa		11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKCH-215	ENST00000555382	TCF20	Q9UGU0	1960 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	GOLGA8A	A7E2F4	631 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	GRXCR1	A8MXD5	290 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	PQBP1	O60828	265 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	CD2BP2	O95400	341 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	PGK1	P00558	417 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	TIMP1	P01033	207 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	BMP1	P13497	986 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	RAG1	P15918	1043 aa		11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	MRPS5	P82675	430 aa	Known RBP	11.12	□□□□□ -0.63
PRKCH-215	ENST00000555382	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms