RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 ZSWIM5Q9P217 1185 aa25.95■■□□□ 1.74
COCH-208ENST00000555117 COL6A3P12111 3177 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 PTGS1P23219 599 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 CALML3P27482 149 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 CDK7P50613 346 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 IQSEC1Q6DN90 963 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 RNF207Q6ZRF8 634 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 ANKS1AQ92625 1134 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 KRT23Q9C075 422 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 UBA5Q9GZZ9 404 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 AP5M1Q9H0R1 490 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 CPVLQ9H3G5 476 aa25.94■■□□□ 1.74
COCH-208ENST00000555117 TNKSO95271 1327 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 ARVCFO00192 962 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 CYP21A2P08686 494 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 CASC1Q6TDU7 716 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 KIAA1211Q6ZU35 1233 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 ENAHQ8N8S7 591 aaPredicted RBP25.93■■□□□ 1.74
COCH-208ENST00000555117 CNNM2Q9H8M5 875 aa25.93■■□□□ 1.74
COCH-208ENST00000555117 RBM8AQ9Y5S9 174 aaKnown RBP25.93■■□□□ 1.74
COCH-208ENST00000555117 LOC102724159A0A0B4J2E5 919 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 DYNC1LI2O43237 492 aaPredicted RBP25.92■■□□□ 1.74
COCH-208ENST00000555117 FPGSQ05932 587 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 PWP2Q15269 919 aaKnown RBP25.92■■□□□ 1.74
COCH-208ENST00000555117 FSCN1Q16658 493 aaKnown RBP25.92■■□□□ 1.74
COCH-208ENST00000555117 USH1GQ495M9 461 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 TMEM63BQ5T3F8 832 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 CXCL17Q6UXB2 119 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 TBX21Q9UL17 535 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 TAF6LQ9Y6J9 622 aa25.92■■□□□ 1.74
COCH-208ENST00000555117 EPHB4P54760 987 aa25.91■■□□□ 1.74
COCH-208ENST00000555117 RPS6P62753 249 aaKnown RBP25.91■■□□□ 1.74
COCH-208ENST00000555117 Q9Y3F1 56 aa25.91■■□□□ 1.74
COCH-208ENST00000555117 TIMP1P01033 207 aa25.9■■□□□ 1.74
COCH-208ENST00000555117 CDC37Q16543 378 aaPredicted RBP25.9■■□□□ 1.74
COCH-208ENST00000555117 ASPRV1Q53RT3 343 aa25.9■■□□□ 1.74
COCH-208ENST00000555117 FAM109BQ6ICB4 259 aaPredicted RBP25.9■■□□□ 1.74
COCH-208ENST00000555117 FAM126BQ8IXS8 530 aa25.9■■□□□ 1.74
COCH-208ENST00000555117 UBAC1Q9BSL1 405 aa25.9■■□□□ 1.74
COCH-208ENST00000555117 ANO2Q9NQ90 1003 aa25.9■■□□□ 1.74
COCH-208ENST00000555117 TLR3O15455 904 aaKnown RBP25.89■■□□□ 1.74
COCH-208ENST00000555117 ZEB2O60315 1214 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 CABYRO75952 493 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 NECTIN1Q15223 517 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 DUSP28Q4G0W2 176 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 ADGRF4Q8IZF3 695 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 STXBP5LQ9Y2K9 1186 aa25.89■■□□□ 1.74
COCH-208ENST00000555117 RNPC3Q96LT9 517 aaKnown RBP25.88■■□□□ 1.73
COCH-208ENST00000555117 MPHOSPH6Q99547 160 aaKnown RBP25.88■■□□□ 1.73
COCH-208ENST00000555117 WDR11Q9BZH6 1224 aa25.88■■□□□ 1.73
COCH-208ENST00000555117 PARP1P09874 1014 aaKnown RBP25.87■■□□□ 1.73
COCH-208ENST00000555117 PDE4DQ08499 809 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 IFIT1BQ5T764 474 aaKnown RBP25.87■■□□□ 1.73
COCH-208ENST00000555117 ZNF697Q5TEC3 545 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 MFSD5Q6N075 450 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 STOX1Q6ZVD7 989 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 SLC43A3Q8NBI5 491 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 DNERQ8NFT8 737 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 FAM161BQ96MY7 647 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 ABCB11O95342 1321 aa25.87■■□□□ 1.73
COCH-208ENST00000555117 RBM47A0AV96 593 aaKnown RBP25.86■■□□□ 1.73
COCH-208ENST00000555117 DHX16O60231 1041 aaKnown RBP25.86■■□□□ 1.73
COCH-208ENST00000555117 EDNRBP24530 442 aa25.86■■□□□ 1.73
COCH-208ENST00000555117 ITGA7Q13683 1181 aa25.86■■□□□ 1.73
COCH-208ENST00000555117 CYB5R4Q7L1T6 521 aa25.86■■□□□ 1.73
COCH-208ENST00000555117 RGS22Q8NE09 1264 aa25.86■■□□□ 1.73
COCH-208ENST00000555117 SLC27A2O14975 620 aa25.85■■□□□ 1.73
COCH-208ENST00000555117 CD4P01730 458 aa25.85■■□□□ 1.73
COCH-208ENST00000555117 SMAD3P84022 425 aaKnown RBP25.85■■□□□ 1.73
COCH-208ENST00000555117 SEC23AQ15436 765 aa25.85■■□□□ 1.73
COCH-208ENST00000555117 PPP1R12CQ9BZL4 782 aa25.85■■□□□ 1.73
COCH-208ENST00000555117 GRIN2DO15399 1336 aa25.85■■□□□ 1.73
COCH-208ENST00000555117 E7EWF7 191 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 TRDNQ13061 729 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 QRICH1Q2TAL8 776 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 CREB3L3Q68CJ9 461 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 SLC17A8Q8NDX2 589 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 GUCD1Q96NT3 240 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 VAT1LQ9HCJ6 419 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 KIAA1217Q5T5P2 1943 aa25.84■■□□□ 1.73
COCH-208ENST00000555117 B4DLN1 442 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 MRPL12P52815 198 aaKnown RBP25.83■■□□□ 1.73
COCH-208ENST00000555117 PSMC6P62333 389 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 PPIGQ13427 754 aaKnown RBP eCLIP25.83■■□□□ 1.73
COCH-208ENST00000555117 PPP2R5BQ15173 497 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 OR6J1Q8NGC5 347 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 TBC1D5Q92609 795 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 SEZ6LQ9BYH1 1024 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 JMJD4Q9H9V9 463 aa25.83■■□□□ 1.73
COCH-208ENST00000555117 CPT1AP50416 773 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 FBXO11Q86XK2 927 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 STAG2Q8N3U4 1231 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 TMEM199Q8N511 208 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 SCFD2Q8WU76 684 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.82■■□□□ 1.72
COCH-208ENST00000555117 MAF1Q9H063 256 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 POLR3EQ9NVU0 708 aa25.82■■□□□ 1.72
COCH-208ENST00000555117 NKRFO15226 690 aaKnown RBP eCLIP25.81■■□□□ 1.72
COCH-208ENST00000555117 CSF2RAP15509 400 aa25.81■■□□□ 1.72
COCH-208ENST00000555117 MCF2L2Q86YR7 1114 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms