RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 LOC105371045A0A1W2PR82 267 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 SRGAP3O43295 1099 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 CD3EP07766 207 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 MAGEA10P43363 369 aaPredicted RBP8.47□□□□□ -1.05
VRK1-203ENST00000555067 CORO7P57737 925 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 ZNF200P98182 395 aaPredicted RBP8.47□□□□□ -1.05
VRK1-203ENST00000555067 MVKQ03426 396 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 FCRL3Q96P31 734 aaPredicted RBP8.47□□□□□ -1.05
VRK1-203ENST00000555067 HAUS7Q99871 368 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 PALD1Q9ULE6 856 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 DIS3Q9Y2L1 958 aaKnown RBP8.47□□□□□ -1.05
VRK1-203ENST00000555067 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
VRK1-203ENST00000555067 TBC1D8O95759 1140 aa8.46□□□□□ -1.06
VRK1-203ENST00000555067 GIPRP48546 466 aa8.46□□□□□ -1.06
VRK1-203ENST00000555067 HTRA3P83110 453 aa8.46□□□□□ -1.06
VRK1-203ENST00000555067 ZDHHC15Q96MV8 337 aa8.46□□□□□ -1.06
VRK1-203ENST00000555067 GBP3Q9H0R5 595 aa8.46□□□□□ -1.06
VRK1-203ENST00000555067 A0A1W2PQJ5 194 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 SH3D21A4FU49 640 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 ADAM17P78536 824 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 GNPTABQ3T906 1256 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 NT5DC1Q5TFE4 455 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 SAPCD2Q86UD0 394 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 FERMT3Q86UX7 667 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 ADGRG2Q8IZP9 1017 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 PTCHD1Q96NR3 888 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 SUSD2Q9UGT4 822 aa8.45□□□□□ -1.06
VRK1-203ENST00000555067 A0A1B0GTL3 188 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 CYBBP04839 570 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 IFNGR1P15260 489 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 GJA8P48165 433 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
VRK1-203ENST00000555067 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
VRK1-203ENST00000555067 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 KLHL25Q9H0H3 589 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 PDLIM7Q9NR12 457 aa8.44□□□□□ -1.06
VRK1-203ENST00000555067 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.44□□□□□ -1.06
VRK1-203ENST00000555067 DBHP09172 617 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 L1CAMP32004 1257 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 ZXDAP98168 799 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 FOXO4P98177 505 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 SLC7A5Q01650 507 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 DLX2Q07687 328 aaPredicted RBP8.43□□□□□ -1.06
VRK1-203ENST00000555067 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 PAQR3Q6TCH7 311 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 NT5DC4Q86YG4 428 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 USP40Q9NVE5 1235 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 DUSP10Q9Y6W6 482 aa8.43□□□□□ -1.06
VRK1-203ENST00000555067 A0A1W2PQH9 124 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 MATN3O15232 486 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 PPM1BO75688 479 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 ATF2P15336 505 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 RBM10P98175 930 aaKnown RBP8.42□□□□□ -1.06
VRK1-203ENST00000555067 PPP2R5DQ14738 602 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 BICRALQ6AI39 1079 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 ADCY4Q8NFM4 1077 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 NLGN2Q8NFZ4 835 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
VRK1-203ENST00000555067 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 PMF1-BGLAPU3KQ54 211 aa8.42□□□□□ -1.06
VRK1-203ENST00000555067 ITGB3P05106 788 aa8.41□□□□□ -1.06
VRK1-203ENST00000555067 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
VRK1-203ENST00000555067 ZNF526Q8TF50 670 aaPredicted RBP8.41□□□□□ -1.06
VRK1-203ENST00000555067 RBM15Q96T37 977 aaKnown RBP eCLIP8.41□□□□□ -1.06
VRK1-203ENST00000555067 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
VRK1-203ENST00000555067 C1QTNF3-AMACRE9PGA6 284 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 AURKAO14965 403 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 SUV39H1O43463 412 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 EPHX1P07099 455 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 NASPP49321 788 aaPredicted RBP8.4□□□□□ -1.06
VRK1-203ENST00000555067 GRB10Q13322 594 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 ADAT2Q7Z6V5 191 aaKnown RBP8.4□□□□□ -1.06
VRK1-203ENST00000555067 HCFC2Q9Y5Z7 792 aa8.4□□□□□ -1.06
VRK1-203ENST00000555067 NOBOXO60393 691 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 SHDQ96IW2 340 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 SEC16BQ96JE7 1060 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 SMPD4Q9NXE4 827 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 CGGBP1Q9UFW8 167 aaPredicted RBP8.39□□□□□ -1.07
VRK1-203ENST00000555067 STRIP2Q9ULQ0 834 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 PCDHB10Q9UN67 800 aa8.39□□□□□ -1.07
VRK1-203ENST00000555067 STXBP3O00186 592 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 CASP7P55210 303 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 AMPD2Q01433 879 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 CABP7Q86V35 215 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 CPLX3Q8WVH0 158 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 KLHL6Q8WZ60 621 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 RCC1LQ96I51 464 aaKnown RBP8.38□□□□□ -1.07
VRK1-203ENST00000555067 MCMBPQ9BTE3 642 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 LNPKQ9C0E8 428 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 BACE2Q9Y5Z0 518 aa8.38□□□□□ -1.07
VRK1-203ENST00000555067 IGSF3O75054 1194 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 TACR1P25103 407 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 CNR2P34972 360 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 SEPHS1P49903 392 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms