RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 TTC14Q96N46 770 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 NUP88Q99567 741 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-208ENST00000555034 SEMA6BQ9H3T3 888 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 RAVER2Q9HCJ3 691 aaKnown RBP9.09□□□□□ -0.95
FOXN3-208ENST00000555034 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 STX8Q9UNK0 236 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 RIPK3Q9Y572 518 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 LAMA3Q16787 3333 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 ZMYM6O95789 1325 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 M0R2C6 588 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 ARVCFO00192 962 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 CHGBP05060 677 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 TAL1P17542 331 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 TNFAIP2Q03169 654 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 HDAC1Q13547 482 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 BRDTQ58F21 947 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 PSRC1Q6PGN9 363 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 CCDC144CPQ8IYA2 1237 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 SYMPKQ92797 1274 aaKnown RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 VTI1AQ96AJ9 217 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 AP5M1Q9H0R1 490 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 VTA1Q9NP79 307 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 RNF146Q9NTX7 359 aa9.08□□□□□ -0.96
FOXN3-208ENST00000555034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
FOXN3-208ENST00000555034 SMIM22K7EJ46 135 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 ICAM1P05362 532 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 SUPT20HL2P0C7V6 817 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 MCCP23508 829 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 MCMDC2Q4G0Z9 681 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 BTNL9Q6UXG8 535 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
FOXN3-208ENST00000555034 GUCD1Q96NT3 240 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 CDX2Q99626 313 aaPredicted RBP9.07□□□□□ -0.96
FOXN3-208ENST00000555034 A1CFQ9NQ94 594 aaKnown RBP9.07□□□□□ -0.96
FOXN3-208ENST00000555034 TBX21Q9UL17 535 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 ISY1Q9ULR0 285 aaKnown RBP9.07□□□□□ -0.96
FOXN3-208ENST00000555034 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 MYH8P13535 1937 aa9.07□□□□□ -0.96
FOXN3-208ENST00000555034 GREB1LQ9C091 1923 aaPredicted RBP9.07□□□□□ -0.96
FOXN3-208ENST00000555034 RAD50Q92878 1312 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 NKRFO15226 690 aaKnown RBP eCLIP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 RANBP6O60518 1105 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 KPNA6O60684 536 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 TOP1P11387 765 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 ALAS1P13196 640 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 C9orf50Q5SZB4 431 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 GPATCH4Q5T3I0 446 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 ANKRD45Q5TZF3 282 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 NOL8Q76FK4 1167 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 SLC43A3Q8NBI5 491 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 MORC4Q8TE76 937 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 RANBP17Q9H2T7 1088 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 POLR3EQ9NVU0 708 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 CCPG1Q9ULG6 757 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 GNEQ9Y223 722 aaKnown RBP9.06□□□□□ -0.96
FOXN3-208ENST00000555034 PCDHB15Q9Y5E8 787 aa9.06□□□□□ -0.96
FOXN3-208ENST00000555034 ZNF536O15090 1300 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 SALL3Q9BXA9 1300 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 MYH7P12883 1935 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 DNAH12Q6ZR08 3092 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 HIP1O00291 1037 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 PFKMP08237 780 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 FOSL2P15408 326 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 CPT1AP50416 773 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 PDE1AP54750 535 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 RAB30Q15771 203 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 FSCN1Q16658 493 aaKnown RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 TSHZ3Q63HK5 1081 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 TLK2Q86UE8 772 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 DGKHQ86XP1 1220 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 FAM126BQ8IXS8 530 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 MAFAQ8NHW3 353 aaPredicted RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 ESR2Q92731 530 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 FGD4Q96M96 766 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 SEC62Q99442 399 aaKnown RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 KATNBL1Q9H079 304 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 RWDD1Q9H446 243 aaPredicted RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 IL17RBQ9NRM6 502 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 HOMER2Q9NSB8 354 aa9.05□□□□□ -0.96
FOXN3-208ENST00000555034 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 BAZ2AQ9UIF9 1905 aaKnown RBP9.05□□□□□ -0.96
FOXN3-208ENST00000555034 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms