RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ENAHQ8N8S7 591 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 SPATA5Q8NB90 893 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 FAM205AQ6ZU69 1335 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 DNM1LO00429 736 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 PALMO75781 387 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 PPP1R37O75864 691 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 SLCO1A2P46721 670 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 EPHB4P54760 987 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 ZNF658Q5TYW1 1059 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 B4GALNT4Q76KP1 1039 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 CATIPQ7Z7H3 387 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 TBC1D1Q86TI0 1168 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 NELFCDQ8IXH7 590 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 NACAP1Q9BZK3 213 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 VEZTQ9HBM0 779 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 DDX20Q9UHI6 824 aaKnown RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 DIP2AQ14689 1571 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 CACNA1FO60840 1977 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 TECPR2O15040 1411 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 ANKRD18BA2A2Z9 1011 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 IRS4O14654 1257 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 CEP104O60308 925 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 SHOX2O60902 331 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 FLT3P36888 993 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 FNTAP49354 379 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 RAPGEF1Q13905 1077 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 CYFIP2Q96F07 1278 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 DDX47Q9H0S4 455 aaKnown RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 TPX2Q9ULW0 747 aaKnown RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 KCNK3O14649 394 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 KIF4AO95239 1232 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 PCCAP05165 728 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 BRD2P25440 801 aaKnown RBP9.84□□□□□ -0.83
SYNE2-217ENST00000555022 LETM2Q2VYF4 491 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC38Q502W7 563 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 STAMBPL1Q96FJ0 436 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 ALS2CR12Q96Q35 445 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 DONSONQ9NYP3 566 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 STK38LQ9Y2H1 464 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 RICTORQ6R327 1708 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 RFX7Q2KHR2 1363 aa9.84□□□□□ -0.83
SYNE2-217ENST00000555022 FOXO6A8MYZ6 492 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 RAD51CO43502 376 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CTNNA1P35221 906 aaKnown RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 GYG1P46976 350 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 BIRC2Q13490 618 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 NEDD9Q14511 834 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SGMS1Q86VZ5 419 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 KIF2BQ8N4N8 673 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SRBD1Q8N5C6 995 aaKnown RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SPATA20Q8TB22 786 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CELF4Q9BZC1 486 aaKnown RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 MYO1AQ9UBC5 1043 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CAPN11Q9UMQ6 739 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 ADAMTSL3P82987 1691 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 TUBB2AQ13885 445 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SNCBQ16143 134 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 KRT71Q3SY84 523 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 KIF6Q6ZMV9 814 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SH3RF1Q7Z6J0 888 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 LPIN2Q92539 896 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 TUBB2BQ9BVA1 445 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 KRT23Q9C075 422 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 HEG1Q9ULI3 1381 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CCDC194A0A1B0GVG4 234 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 RAD21O60216 631 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 PLCG1P19174 1290 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 TECP42680 631 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 MAGOHP61326 146 aaKnown RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 IFFO1Q0D2I5 559 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 LRCH2Q5VUJ6 765 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CYB5D1Q6P9G0 228 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 PRCCQ92733 491 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 MAGOHBQ96A72 148 aaKnown RBP9.83□□□□□ -0.84
SYNE2-217ENST00000555022 SH3GL2Q99962 352 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 EPN3Q9H201 632 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 ASAP1Q9ULH1 1129 aa9.83□□□□□ -0.84
SYNE2-217ENST00000555022 CHUKO15111 745 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 GCKP35557 465 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
SYNE2-217ENST00000555022 PARP9Q8IXQ6 854 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 ADSSL1Q8N142 457 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 DNAJC7Q99615 494 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 DUSP9Q99956 384 aaKnown RBP9.82□□□□□ -0.84
SYNE2-217ENST00000555022 TLR10Q9BXR5 811 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms