RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 ARMCX2Q7L311 632 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 KATNBL1Q9H079 304 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-214ENST00000554928 NAP1L2Q9ULW6 460 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-214ENST00000554928 PFASO15067 1338 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 CNTNAP5Q8WYK1 1306 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.11
SYNE2-214ENST00000554928 PNMA6FA0A0J9YX94 578 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 TFRCP02786 760 aaKnown RBP14.33□□□□□ -0.12
SYNE2-214ENST00000554928 CALM1P0DP23 149 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 CALM2P0DP24 149 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 CALM3P0DP25 149 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 KIF5BP33176 963 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
SYNE2-214ENST00000554928 FGD1P98174 961 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 RTN1Q16799 776 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 UBE2Q1Q7Z7E8 422 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-214ENST00000554928 SYTL5Q8TDW5 730 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-214ENST00000554928 TAAR1Q96RJ0 339 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.12
SYNE2-214ENST00000554928 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
SYNE2-214ENST00000554928 DTNBO60941 627 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-214ENST00000554928 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-214ENST00000554928 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 NCOA5Q9HCD5 579 aaKnown RBP14.32□□□□□ -0.12
SYNE2-214ENST00000554928 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-214ENST00000554928 OGDHLQ9ULD0 1010 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 MRPL11Q9Y3B7 192 aaKnown RBP14.32□□□□□ -0.12
SYNE2-214ENST00000554928 SYNGAP1Q96PV0 1343 aa14.32□□□□□ -0.12
SYNE2-214ENST00000554928 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 SEPT4O43236 478 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 CFBP00751 764 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 GNAQP50148 359 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 METAP2P50579 478 aaKnown RBP eCLIP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 ACVR2BQ13705 512 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 FBXO16Q8IX29 292 aaPredicted RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
SYNE2-214ENST00000554928 IL17RAQ96F46 866 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 PNMA2Q9UL42 364 aa14.31□□□□□ -0.12
SYNE2-214ENST00000554928 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-214ENST00000554928 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 HSD17B4P51659 736 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 EVCP57679 992 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 ANAPC15P60006 121 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-214ENST00000554928 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-214ENST00000554928 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 PAWRQ96IZ0 340 aaKnown RBP14.3□□□□□ -0.12
SYNE2-214ENST00000554928 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 MCM3APO60318 1980 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 NID2Q14112 1375 aa14.3□□□□□ -0.12
SYNE2-214ENST00000554928 LRRC37A2A6NM11 1700 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 ADAMTS3O15072 1205 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 EDNRBP24530 442 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 ADCYAP1R1P41586 468 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 GHRHRQ02643 423 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 NTRK3Q16288 839 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 CCDC144BQ3MJ40 725 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 GJC2Q5T442 439 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-214ENST00000554928 WWC2Q6AWC2 1192 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 TAPT1Q6NXT6 567 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 IL31RAQ8NI17 732 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 ZFP91Q96JP5 570 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-214ENST00000554928 KIF2CQ99661 725 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
SYNE2-214ENST00000554928 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
SYNE2-214ENST00000554928 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-214ENST00000554928 TNRC18O15417 2968 aaPredicted RBP14.28□□□□□ -0.12
SYNE2-214ENST00000554928 ASB14A6NK59 587 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 LARGE1O95461 756 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 PGK1P00558 417 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 MYH6P13533 1939 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
SYNE2-214ENST00000554928 RCAN1P53805 252 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 AK2P54819 239 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 STK3Q13188 491 aa14.28□□□□□ -0.12
SYNE2-214ENST00000554928 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms