RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RRAGAQ7L523 313 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 ZNF507Q8TCN5 953 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 RUFY1Q96T51 708 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 TMEM47Q9BQJ4 181 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 CCSER1Q9C0I3 900 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 MLXIPQ9HAP2 919 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 MOCS3O95396 460 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 PLEKP08567 350 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 CXCR5P32302 372 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 SBK1Q52WX2 424 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 C12orf60Q5U649 245 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 WDR93Q6P2C0 686 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 CNNM4Q6P4Q7 775 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 SV2BQ7L1I2 683 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 UIMC1Q96RL1 719 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 TRIM9Q9C026 710 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 KBTBD4Q9NVX7 518 aa10.59□□□□□ -0.71
SYNE2-213ENST00000554805 SRP68Q9UHB9 627 aaKnown RBP10.59□□□□□ -0.71
SYNE2-213ENST00000554805 DNAJC21Q5F1R6 531 aaKnown RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 CCDC170Q8IYT3 715 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 MAD2L2Q9UI95 211 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 ECM29Q5VYK3 1845 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 EIF3CLB5ME19 914 aaKnown RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 STXBP3O00186 592 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 TULP2O00295 520 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 ZPR1O75312 459 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 MYL1P05976 194 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 GNA11P29992 359 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 EIF4A3P38919 411 aaKnown RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 PAFAH1B1P43034 410 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 MAGEA1P43355 309 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 NEK8Q86SG6 692 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 RETREG2Q8NC44 543 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 ALS2CR12Q96Q35 445 aa10.58□□□□□ -0.72
SYNE2-213ENST00000554805 EIF3CQ99613 913 aaKnown RBP10.58□□□□□ -0.72
SYNE2-213ENST00000554805 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-213ENST00000554805 CYTH3O43739 400 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 RAD21O60216 631 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 GGCXP38435 758 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 VAV2P52735 878 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 SLC7A5Q01650 507 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 PAPD7Q5XG87 772 aaKnown RBP10.57□□□□□ -0.72
SYNE2-213ENST00000554805 CLEC4GQ6UXB4 293 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 TBCKQ8TEA7 893 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 SELENOOQ9BVL4 669 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 TSGA10Q9BZW7 698 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 SMARCAL1Q9NZC9 954 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 HPCAL4Q9UM19 191 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 MYH3P11055 1940 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 MYH6P13533 1939 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 NUP98P52948 1817 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 TIAM2Q8IVF5 1701 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 GOLGA6BA6NDN3 693 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 LRRC41Q15345 812 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 TMEM266Q2M3C6 531 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 GALNT17Q6IS24 598 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 EYA3Q99504 573 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 NLRC4Q9NPP4 1024 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 BAZ2AQ9UIF9 1905 aaKnown RBP10.57□□□□□ -0.72
SYNE2-213ENST00000554805 SLIT2O94813 1529 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 LAD1O00515 517 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 CCDC40Q4G0X9 1142 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 SRLQ86TD4 932 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 FAM76AQ8TAV0 307 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 COG1Q8WTW3 980 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 CUEDC2Q9H467 287 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 ZNF287Q9HBT7 754 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 PCDHA13Q9Y5I0 950 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 CHD4Q14839 1912 aa10.57□□□□□ -0.72
SYNE2-213ENST00000554805 MYH8P13535 1937 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 BUB1O43683 1085 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 FGFR1OPO95684 399 aaKnown RBP10.56□□□□□ -0.72
SYNE2-213ENST00000554805 LDHCP07864 332 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 ARID5AQ03989 594 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 AK8Q96MA6 479 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 PIGSQ96S52 555 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 GOLGA6CA6NDK9 693 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 NCK2O43639 380 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 GOLGA6DP0CG33 693 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 TNNI2P48788 182 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 KIF11P52732 1056 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
SYNE2-213ENST00000554805 GSTO1P78417 241 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 EZH2Q15910 746 aaKnown RBP10.56□□□□□ -0.72
SYNE2-213ENST00000554805 CALCRLQ16602 461 aa10.56□□□□□ -0.72
SYNE2-213ENST00000554805 CCNI2Q6ZMN8 369 aaPredicted RBP10.56□□□□□ -0.72
SYNE2-213ENST00000554805 TEX11Q8IYF3 940 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms