RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RHBDL3P58872 404 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 MMTAG2Q9BU76 263 aaKnown RBP17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CAPN11Q9UMQ6 739 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 SLC37A4O43826 429 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 CCNE1P24864 410 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 HERVK_113P62684 666 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 CALCRLQ16602 461 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 DHTKD1Q96HY7 919 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 LRWD1Q9UFC0 647 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 UBE2SQ16763 222 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 AK8Q96MA6 479 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 MXD3Q9BW11 206 aa17.53■□□□□ 0.4
ARHGEF40-203ENST00000554514 SERPINB2P05120 415 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 AKR1B1P15121 316 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 ST5P78524 1137 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 KIAA0895Q8NCT3 520 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 DNAJC7Q99615 494 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 ABCB6Q9NP58 842 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 MACROD2A1Z1Q3 448 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 CCDC151A5D8V7 595 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 ATP1A1P05023 1023 aaKnown RBP17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 SRGNP10124 158 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 PDHBP11177 359 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 ATP2B4P23634 1241 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 DUSP10Q9Y6W6 482 aa17.52■□□□□ 0.4
ARHGEF40-203ENST00000554514 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 TOM1O60784 492 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 MYL1P05976 194 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 SLC16A2P36021 539 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 VSNL1P62760 191 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 SV2BQ7L1I2 683 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 NEK11Q8NG66 645 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 PLCG2P16885 1265 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 AMPD3Q01432 767 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 BRD3Q15059 726 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 LRRC41Q15345 812 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 JAKMIP2Q96AA8 810 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 FAM207AQ9NSI2 230 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 DAGLAQ9Y4D2 1042 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 DDX60LQ5H9U9 1706 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 RCCD1A6NED2 376 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 MYMKA6NI61 221 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 MARCH6O60337 910 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 PLEKP08567 350 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 SCNN1DP51172 638 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 ADCY7P51828 1080 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 GRB10Q13322 594 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 C7orf25Q9BPX7 421 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 LACRTQ9GZZ8 138 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 CUEDC2Q9H467 287 aa17.51■□□□□ 0.39
ARHGEF40-203ENST00000554514 H3BQF6 201 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 WHAMMP3Q1A5X7 153 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 TTBK2Q6IQ55 1244 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 PDE11AQ9HCR9 933 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 IL1R1P14778 569 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 GLIS3Q8NEA6 775 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 SNX29Q8TEQ0 813 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 MYH1P12882 1939 aa17.5■□□□□ 0.39
ARHGEF40-203ENST00000554514 ATP8B1O43520 1251 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 CCDC96Q2M329 555 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 MIIPQ5JXC2 388 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 FKBP15Q5T1M5 1219 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 NOC3LQ8WTT2 800 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 DRC1Q96MC2 740 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 MYO1AQ9UBC5 1043 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 CYLC1P35663 651 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 BEND6Q5SZJ8 279 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 FAM114A1Q8IWE2 563 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 LARP4BQ92615 738 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 PNMA5Q96PV4 448 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 MMRN2Q9H8L6 949 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
ARHGEF40-203ENST00000554514 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 GYS1P13807 737 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 AMPD2Q01433 879 aa17.48■□□□□ 0.39
ARHGEF40-203ENST00000554514 MAGEF1Q9HAY2 307 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms