RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 CHPF2Q9P2E5 772 aa5.9□□□□□ -1.46
IFT43-207ENST00000554233 CCDC39Q9UFE4 941 aa5.9□□□□□ -1.46
IFT43-207ENST00000554233 NIP7Q9Y221 180 aaKnown RBP eCLIP5.9□□□□□ -1.46
IFT43-207ENST00000554233 ABCC12Q96J65 1359 aa5.9□□□□□ -1.47
IFT43-207ENST00000554233 ADAMTSL1Q8N6G6 1762 aa5.9□□□□□ -1.47
IFT43-207ENST00000554233 PNMA6FA0A0J9YX94 578 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 ZNF862O60290 1169 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 MYL6BP14649 208 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 NPR1P16066 1061 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 ERCC3P19447 782 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 EIF2S2P20042 333 aaKnown RBP5.89□□□□□ -1.47
IFT43-207ENST00000554233 CHRNA5P30532 468 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 ST5P78524 1137 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 SUSD4Q5VX71 490 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 PPP1R42Q7Z4L9 355 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 NBPF5PQ86XG9 351 aaPredicted RBP5.89□□□□□ -1.47
IFT43-207ENST00000554233 TSPYL6Q8N831 410 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 XAGE3Q8WTP9 111 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 CRAMP1Q96RY5 1269 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 C1GALT1Q9NS00 363 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 AKAP2Q9Y2D5 859 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 FANCIQ9NVI1 1328 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 DUOX1Q9NRD9 1551 aa5.89□□□□□ -1.47
IFT43-207ENST00000554233 COL4A1P02462 1669 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 ECM29Q5VYK3 1845 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 PAX4O43316 350 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 VAMP4O75379 141 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 ANXA1P04083 346 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 GSTP1P09211 210 aaKnown RBP5.88□□□□□ -1.47
IFT43-207ENST00000554233 SLFN14P0C7P3 912 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 PRELPP51888 382 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 PLCB3Q01970 1234 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 PPP2R3AQ06190 1150 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 DSC3Q14574 896 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 TWISTNBQ3B726 338 aaPredicted RBP5.88□□□□□ -1.47
IFT43-207ENST00000554233 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.88□□□□□ -1.47
IFT43-207ENST00000554233 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 NXPE4Q6UWF7 544 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 C2CD5Q86YS7 1000 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 KCNB2Q92953 911 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 PIDD1Q9HB75 910 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 TMEM39AQ9NV64 488 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 CRIM1Q9NZV1 1036 aa5.88□□□□□ -1.47
IFT43-207ENST00000554233 MYH13Q9UKX3 1938 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 LMNB1P20700 586 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 CYP27A1Q02318 531 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 ID3Q02535 119 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 SF3B3Q15393 1217 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 VSIG10LQ86VR7 867 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 TP53INP2Q8IXH6 220 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 CCDC191Q8NCU4 936 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 FANCD2OSQ96PS1 177 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 PSMD1Q99460 953 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 UTP14AQ9BVJ6 771 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 PHAXQ9H814 394 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 BSDC1Q9NW68 430 aaPredicted RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 ZC3H7BQ9UGR2 993 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 ADGRE2Q9UHX3 823 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
IFT43-207ENST00000554233 SYNGAP1Q96PV0 1343 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 CDHR2Q9BYE9 1310 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 RTL9Q8NET4 1388 aa5.87□□□□□ -1.47
IFT43-207ENST00000554233 COL4A5P29400 1685 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 SH3TC1Q8TE82 1336 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 TREHO43280 583 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 PRNPP04156 253 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 PCCAP05165 728 aaPredicted RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 IGKV5-2P06315 115 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 CT47B1P0C2W7 299 aaPredicted RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 XRCC5P13010 732 aaKnown RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 MAPK8P45983 427 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 CDK5R2Q13319 367 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 OGFOD3Q6PK18 319 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 NFXL1Q6ZNB6 911 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 TMC4Q7Z404 712 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 PDZD3Q86UT5 571 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 RTKN2Q8IZC4 609 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 FAM9BQ8IZU0 186 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 ZBTB38Q8NAP3 1195 aaPredicted RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 STK35Q8TDR2 534 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 PLA2G12BQ9BX93 195 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 RTFDC1Q9BY42 306 aaPredicted RBP5.86□□□□□ -1.47
IFT43-207ENST00000554233 VPS33BQ9H267 617 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 ATXN3LQ9H3M9 355 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 MYH16Q9H6N6 1097 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 KRT82Q9NSB4 513 aa5.86□□□□□ -1.47
IFT43-207ENST00000554233 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
IFT43-207ENST00000554233 BBOX1O75936 387 aa5.85□□□□□ -1.47
IFT43-207ENST00000554233 DDX58O95786 925 aaKnown RBP5.85□□□□□ -1.47
IFT43-207ENST00000554233 HCLS1P14317 486 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms