RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 RASGRP4Q8TDF6 673 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PIGSQ96S52 555 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TINF2Q9BSI4 451 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 WDR11Q9BZH6 1224 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 C11orf49Q9H6J7 331 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ACAD9Q9H845 621 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ZSWIM5Q9P217 1185 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RBM27Q9P2N5 1060 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 INPP5FQ9Y2H2 1132 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CEP250Q9BV73 2442 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CDH23Q9H251 3354 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 COBLO75128 1261 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ASGR1P07306 291 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF286BP0CG31 522 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CSF2RAP15509 400 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CTGFP29279 349 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 MAGEA10P43363 369 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RTP1P59025 263 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RPS6P62753 249 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PTH1RQ03431 593 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RAD51AP2Q09MP3 1159 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 APOBRQ0VD83 1088 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TRIM29Q14134 588 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 UBE3CQ15386 1083 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 KCNA10Q16322 511 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 CDC37Q16543 378 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 KIAA1755Q5JYT7 1200 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM63BQ5T3F8 832 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 C17orf99Q6UX52 265 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TRIM50Q86XT4 487 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NECAB1Q8N987 351 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 AFG1LQ8WV93 481 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PLIN2Q99541 437 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RIOK1Q9BRS2 568 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 TRPV6Q9H1D0 765 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PRDM12Q9H4Q4 367 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RNF19AQ9NV58 838 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 MTMR4Q9NYA4 1195 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 ADD3Q9UEY8 706 aaKnown RBP2.89□□□□□ -1.95
PRPF39-205ENST00000554081 SWAP70Q9UH65 585 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PGAP2Q9UHJ9 254 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 FAM184BQ9ULE4 1060 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 PRR12Q9ULL5 1215 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 RFX7Q2KHR2 1363 aa2.89□□□□□ -1.95
PRPF39-205ENST00000554081 NBASA2RRP1 2371 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 MYO18BQ8IUG5 2567 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 A0A0G2JLL6 359 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 VPS37CA5D8V6 355 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 B4DLN1 442 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 KIF28PB7ZC32 967 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 VWA5AO00534 786 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 COPB2P35606 906 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 THPOP40225 353 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 MRPL12P52815 198 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 ACVR2BQ13705 512 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM266Q2M3C6 531 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 MUM1L1Q5H9M0 696 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PRPF38BQ5VTL8 546 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 CATSPERGQ6ZRH7 1159 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 ARMCX2Q7L311 632 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 CYFIP1Q7L576 1253 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SH3RF1Q7Z6J0 888 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PRRT2Q7Z6L0 340 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TLK2Q86UE8 772 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PLEKHM2Q8IWE5 1019 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SHCBP1Q8NEM2 672 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 ZBTB10Q96DT7 871 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 FAM212AQ96EL1 285 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 RRP36Q96EU6 259 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SPATA33Q96N06 139 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PANK2Q9BZ23 570 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 AZI2Q9H6S1 392 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 EPB41L4AQ9HCS5 686 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 IBTKQ9P2D0 1353 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SPTBN4Q9H254 2564 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PHF20L1A8MW92 1017 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 H3BQV1 296 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 HIP1O00291 1037 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 DLL1O00548 723 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 WDR46O15213 610 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TLR3O15455 904 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 GTPBP6O43824 516 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 GGPS1O95749 300 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TOP1P11387 765 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 AKR1A1P14550 325 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 FOSL2P15408 326 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PTPREP23469 700 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 DNAJB2P25686 324 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 ADD1P35611 737 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 HABP4Q5JVS0 413 aaKnown RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TBC1D10CQ8IV04 446 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TRIM22Q8IYM9 498 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 RASEFQ8IZ41 740 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 PROCA1Q8NCQ7 364 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-205ENST00000554081 SOCS4Q8WXH5 440 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 GJA10Q969M2 543 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 TAAR1Q96RJ0 339 aa2.88□□□□□ -1.95
PRPF39-205ENST00000554081 APBA2Q99767 749 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms