RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RPS26P62854 115 aaKnown RBP4.56□□□□□ -1.68
SLIRP-202ENST00000553981 SEPT6Q14141 434 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 LILRA6Q6PI73 481 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 TMPRSS7Q7RTY8 843 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 COL23A1Q86Y22 540 aaPredicted RBP4.56□□□□□ -1.68
SLIRP-202ENST00000553981 MRPL41Q8IXM3 137 aaKnown RBP4.56□□□□□ -1.68
SLIRP-202ENST00000553981 PIWIL2Q8TC59 973 aaKnown RBP4.56□□□□□ -1.68
SLIRP-202ENST00000553981 MYLIPQ8WY64 445 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 SLC12A5Q9H2X9 1139 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 EPB41L4BQ9H329 900 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 CD320Q9NPF0 282 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 TJP2Q9UDY2 1190 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 MEGF6O75095 1541 aa4.56□□□□□ -1.68
SLIRP-202ENST00000553981 BRD4O60885 1362 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-202ENST00000553981 HPXP02790 462 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 TMEM253P0C7T8 217 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 MED14OSP0DP75 135 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 HK2P52789 917 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 KCNA10Q16322 511 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 ATG14Q6ZNE5 492 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.55□□□□□ -1.68
SLIRP-202ENST00000553981 TMEM87BQ96K49 555 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 Q96M66 194 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 DUSP15Q9H1R2 295 aaPredicted RBP4.55□□□□□ -1.68
SLIRP-202ENST00000553981 ADAMTS10Q9H324 1103 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 TACC3Q9Y6A5 838 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 KIAA1551Q9HCM1 1747 aa4.55□□□□□ -1.68
SLIRP-202ENST00000553981 ADCY9O60503 1353 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 CCDC7Q96M83 1385 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 TAF1LQ8IZX4 1826 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 KAT6BQ8WYB5 2073 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 ETV2O00321 342 aaPredicted RBP4.54□□□□□ -1.68
SLIRP-202ENST00000553981 PGRP06401 933 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 LDHBP07195 334 aaKnown RBP4.54□□□□□ -1.68
SLIRP-202ENST00000553981 IL2RBP14784 551 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 EIF4BP23588 611 aaKnown RBP4.54□□□□□ -1.68
SLIRP-202ENST00000553981 TPP2P29144 1249 aaPredicted RBP4.54□□□□□ -1.68
SLIRP-202ENST00000553981 CCDC85BQ15834 202 aaPredicted RBP4.54□□□□□ -1.68
SLIRP-202ENST00000553981 SLC6A19Q695T7 634 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 AGMOQ6ZNB7 445 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 TTLL10Q6ZVT0 673 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 CREG2Q8IUH2 290 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 FRMD6Q96NE9 622 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 SP110Q9HB58 689 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 ATP10DQ9P241 1426 aa4.54□□□□□ -1.68
SLIRP-202ENST00000553981 A0A1W2PP64 1363 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 KTN1Q86UP2 1357 aaKnown RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 MAP2P11137 1827 aaKnown RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 TTC21AQ8NDW8 1320 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 TCAF2A6NFQ2 919 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 LMNB1P20700 586 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 GLDCP23378 1020 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 GNA15P30679 374 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 TRHRP34981 398 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 ETV3P41162 512 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 GPR162Q16538 588 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 GAB4Q2WGN9 574 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 MCATQ8IVS2 390 aaKnown RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 USHBP1Q8N6Y0 703 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 KCNH5Q8NCM2 988 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 DNAJB8Q8NHS0 232 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 ACSF2Q96CM8 615 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 LTV1Q96GA3 475 aaPredicted RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 SMG5Q9UPR3 1016 aaKnown RBP4.53□□□□□ -1.68
SLIRP-202ENST00000553981 IVNS1ABPQ9Y6Y0 642 aa4.53□□□□□ -1.68
SLIRP-202ENST00000553981 MAP3K19Q56UN5 1328 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 EVC2Q86UK5 1308 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 SRFP11831 508 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 TFE3P19532 575 aaPredicted RBP4.52□□□□□ -1.69
SLIRP-202ENST00000553981 HOXC9P31274 260 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 LIG3P49916 1009 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 HTRA3P83110 453 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 MAP3K11Q16584 847 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 PPP1R13LQ8WUF5 828 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 IP6K1Q92551 441 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 KCNN1Q92952 543 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 TESK2Q96S53 571 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 RNF32Q9H0A6 362 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 MIR1-1HGQ9H1L0 117 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 TRIT1Q9H3H1 467 aaKnown RBP4.52□□□□□ -1.69
SLIRP-202ENST00000553981 RAPGEFL1Q9UHV5 662 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 CEP131Q9UPN4 1083 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 ANKRD36BQ8N2N9 1353 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 UBR3Q6ZT12 1888 aa4.52□□□□□ -1.69
SLIRP-202ENST00000553981 C5P01031 1676 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 ITGB4P16144 1822 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 NCANO14594 1321 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 PRRG2O14669 202 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 CYP27B1O15528 508 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 INHBBP09529 407 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 ZGLP1P0C6A0 271 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 LINC00310P59036 64 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 RPL6Q02878 288 aaKnown RBP4.51□□□□□ -1.69
SLIRP-202ENST00000553981 EGR3Q06889 387 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 PDE4BQ07343 736 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 RRS1Q15050 365 aaKnown RBP4.51□□□□□ -1.69
SLIRP-202ENST00000553981 TSNAXIP1Q2TAA8 658 aa4.51□□□□□ -1.69
SLIRP-202ENST00000553981 CIAPIN1Q6FI81 312 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms