RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TKFCQ3LXA3 575 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 BRAPQ7Z569 592 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
PRKCH-206ENST00000553830 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 R3HDMLQ9H3Y0 253 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 MEIS2O14770 477 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRKCH-206ENST00000553830 TM4SF4P48230 202 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.17
PRKCH-206ENST00000553830 CRHR2Q13324 411 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 NBR1Q14596 966 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 INF2Q27J81 1249 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 RNF207Q6ZRF8 634 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.17
PRKCH-206ENST00000553830 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRKCH-206ENST00000553830 GLT8D2Q9H1C3 349 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 TFIP11Q9UBB9 837 aaKnown RBP16.14■□□□□ 0.17
PRKCH-206ENST00000553830 MGAMO43451 1857 aa16.14■□□□□ 0.17
PRKCH-206ENST00000553830 DOCK3Q8IZD9 2030 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 M0R2N6 131 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 UBXN2AP68543 259 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 NONOQ15233 471 aaKnown RBP eCLIP16.13■□□□□ 0.17
PRKCH-206ENST00000553830 TPRNQ4KMQ1 711 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 CHST13Q8NET6 341 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 ANO3Q9BYT9 981 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 PORCNQ9H237 461 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 EFCC1Q9HA90 598 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
PRKCH-206ENST00000553830 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
PRKCH-206ENST00000553830 ATP6V1DQ9Y5K8 247 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 ADGRA2Q96PE1 1338 aa16.13■□□□□ 0.17
PRKCH-206ENST00000553830 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 FIBPO43427 364 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 SLC25A27O95847 323 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
PRKCH-206ENST00000553830 CCNA1P78396 465 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
PRKCH-206ENST00000553830 ANKRD35Q8N283 1001 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
PRKCH-206ENST00000553830 PURBQ96QR8 312 aaKnown RBP16.12■□□□□ 0.17
PRKCH-206ENST00000553830 COL20A1Q9P218 1284 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 CNPY2Q9Y2B0 182 aa16.12■□□□□ 0.17
PRKCH-206ENST00000553830 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 HSPA6P17066 643 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 COPB2P35606 906 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 HSD17B4P51659 736 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 RPS6P62753 249 aaKnown RBP16.11■□□□□ 0.17
PRKCH-206ENST00000553830 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
PRKCH-206ENST00000553830 TBCKQ8TEA7 893 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 MMP19Q99542 508 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 GDPD2Q9HCC8 539 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 A1CFQ9NQ94 594 aaKnown RBP16.11■□□□□ 0.17
PRKCH-206ENST00000553830 MORF4L1Q9UBU8 362 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 THSD7BQ9C0I4 1608 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 MCM3APO60318 1980 aa16.11■□□□□ 0.17
PRKCH-206ENST00000553830 PIK3CDO00329 1044 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 WNT7AO00755 349 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 CA12O43570 354 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 TLR2O60603 784 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
PRKCH-206ENST00000553830 ALDH1A1P00352 501 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 TOB1P50616 345 aaPredicted RBP16.1■□□□□ 0.17
PRKCH-206ENST00000553830 AP3B2Q13367 1082 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 ZNF174Q15697 407 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 FAM110CQ1W6H9 321 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 TTC38Q5R3I4 469 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
PRKCH-206ENST00000553830 TAAR1Q96RJ0 339 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 USP28Q96RU2 1077 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 CLIC4Q9Y696 253 aa16.1■□□□□ 0.17
PRKCH-206ENST00000553830 TRPA1O75762 1119 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 PGK2P07205 417 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 BCRP11274 1271 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 EIF2AK2P19525 551 aaKnown RBP16.09■□□□□ 0.17
PRKCH-206ENST00000553830 MCM7P33993 719 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 MAP2K2P36507 400 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 KRT85P78386 507 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 KCTD2Q14681 263 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
PRKCH-206ENST00000553830 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 MROH8Q9H579 483 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 CYP39A1Q9NYL5 469 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 PCDHB6Q9Y5E3 794 aa16.09■□□□□ 0.17
PRKCH-206ENST00000553830 KIAA1217Q5T5P2 1943 aa16.08■□□□□ 0.16
PRKCH-206ENST00000553830 POTEB2H3BUK9 544 aa16.08■□□□□ 0.16
PRKCH-206ENST00000553830 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms