RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 WDR11Q9BZH6 1224 aa20.95■□□□□ 0.94
SYNE2-211ENST00000553801 GPHNQ9NQX3 736 aaPredicted RBP20.95■□□□□ 0.94
SYNE2-211ENST00000553801 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
SYNE2-211ENST00000553801 RANBP6O60518 1105 aaKnown RBP20.94■□□□□ 0.94
SYNE2-211ENST00000553801 ACTN1P12814 892 aa20.94■□□□□ 0.94
SYNE2-211ENST00000553801 CTDSPL2Q05D32 466 aa20.94■□□□□ 0.94
SYNE2-211ENST00000553801 BAATQ14032 418 aaPredicted RBP20.94■□□□□ 0.94
SYNE2-211ENST00000553801 BRDTQ58F21 947 aaPredicted RBP20.94■□□□□ 0.94
SYNE2-211ENST00000553801 RANBP17Q9H2T7 1088 aaKnown RBP20.94■□□□□ 0.94
SYNE2-211ENST00000553801 MTMR7Q9Y216 660 aa20.94■□□□□ 0.94
SYNE2-211ENST00000553801 NMT2O60551 498 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 ALDH5A1P51649 535 aaPredicted RBP20.93■□□□□ 0.94
SYNE2-211ENST00000553801 AAK1Q2M2I8 961 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 TMEM63BQ5T3F8 832 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 PI4K2BQ8TCG2 481 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 MPHOSPH6Q99547 160 aaKnown RBP20.93■□□□□ 0.94
SYNE2-211ENST00000553801 MTG1Q9BT17 334 aaPredicted RBP20.93■□□□□ 0.94
SYNE2-211ENST00000553801 TRMT13Q9NUP7 481 aaKnown RBP20.93■□□□□ 0.94
SYNE2-211ENST00000553801 PNMA2Q9UL42 364 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 TNKSO95271 1327 aa20.93■□□□□ 0.94
SYNE2-211ENST00000553801 MYL3P08590 195 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 CYP2C9P11712 490 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 MYOGP15173 224 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 PURAQ00577 322 aaKnown RBP20.92■□□□□ 0.94
SYNE2-211ENST00000553801 BTNL9Q6UXG8 535 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 MICALL1Q8N3F8 863 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 PURBQ96QR8 312 aaKnown RBP20.92■□□□□ 0.94
SYNE2-211ENST00000553801 ANAPC4Q9UJX5 808 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 RAD50Q92878 1312 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 CHD9Q3L8U1 2897 aa20.92■□□□□ 0.94
SYNE2-211ENST00000553801 RBM47A0AV96 593 aaKnown RBP20.91■□□□□ 0.94
SYNE2-211ENST00000553801 PTPDC1A2A3K4 754 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 NKRFO15226 690 aaKnown RBP eCLIP20.91■□□□□ 0.94
SYNE2-211ENST00000553801 GTPBP6O43824 516 aaPredicted RBP20.91■□□□□ 0.94
SYNE2-211ENST00000553801 ORC4O43929 436 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 KPNA6O60684 536 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 RFC2P35250 354 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 NOVP48745 357 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 TTLL4Q14679 1199 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 SYDE2Q5VT97 1194 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 DEFB128Q7Z7B8 93 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 OR6J1Q8NGC5 347 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 VWCEQ96DN2 955 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 INCENPQ9NQS7 918 aa20.91■□□□□ 0.94
SYNE2-211ENST00000553801 SLC16A2P36021 539 aa20.9■□□□□ 0.94
SYNE2-211ENST00000553801 TTBK2Q6IQ55 1244 aa20.9■□□□□ 0.94
SYNE2-211ENST00000553801 RETREG2Q8NC44 543 aa20.9■□□□□ 0.94
SYNE2-211ENST00000553801 LCTP09848 1927 aa20.9■□□□□ 0.94
SYNE2-211ENST00000553801 B4DLN1 442 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 NFIBO00712 420 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
SYNE2-211ENST00000553801 POU3F3P20264 500 aaPredicted RBP20.89■□□□□ 0.93
SYNE2-211ENST00000553801 MRPL12P52815 198 aaKnown RBP20.89■□□□□ 0.93
SYNE2-211ENST00000553801 PDE4DQ08499 809 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 SKIV2LQ15477 1246 aaKnown RBP20.89■□□□□ 0.93
SYNE2-211ENST00000553801 FAM47CQ5HY64 1035 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 NFRKBQ6P4R8 1299 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 RASGRP2Q7LDG7 609 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 PHOSPHO2Q8TCD6 241 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 SLC9A7Q96T83 725 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 TOMM22Q9NS69 142 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 MUC3AQ02505 3323 aa20.89■□□□□ 0.93
SYNE2-211ENST00000553801 KIF28PB7ZC32 967 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 FOXP2O15409 715 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 FGRP09769 529 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 BMP1P13497 986 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 MX1P20591 662 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 CALML3P27482 149 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 PTPN11Q06124 597 aaPredicted RBP20.88■□□□□ 0.93
SYNE2-211ENST00000553801 PPP2R5BQ15173 497 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 ALX1Q15699 326 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 NBPF20Q3BBV1 942 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 RNF207Q6ZRF8 634 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 SCFD2Q8WU76 684 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 GPCPD1Q9NPB8 672 aa20.88■□□□□ 0.93
SYNE2-211ENST00000553801 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
SYNE2-211ENST00000553801 PRRC2BQ5JSZ5 2229 aaKnown RBP20.88■□□□□ 0.93
SYNE2-211ENST00000553801 SCN10AQ9Y5Y9 1956 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 PITPNM1O00562 1244 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 CA3P07451 260 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 BFSP2Q13515 415 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 DNERQ8NFT8 737 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 OTUD7AQ8TE49 926 aaPredicted RBP20.87■□□□□ 0.93
SYNE2-211ENST00000553801 TMEM47Q9BQJ4 181 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 FTOQ9C0B1 505 aaKnown RBP eCLIP20.87■□□□□ 0.93
SYNE2-211ENST00000553801 TCP11L1Q9NUJ3 509 aa20.87■□□□□ 0.93
SYNE2-211ENST00000553801 ZBTB47Q9UFB7 747 aaPredicted RBP20.87■□□□□ 0.93
SYNE2-211ENST00000553801 FRMPD2Q68DX3 1309 aaPredicted RBP20.86■□□□□ 0.93
SYNE2-211ENST00000553801 IQCF3P0C7M6 154 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 RRP12Q5JTH9 1297 aaKnown RBP20.86■□□□□ 0.93
SYNE2-211ENST00000553801 CLEC4DQ8WXI8 215 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 C1QTNF1Q9BXJ1 281 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 HELLSQ9NRZ9 838 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 NOD1Q9Y239 953 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 MTCH2Q9Y6C9 303 aa20.86■□□□□ 0.93
SYNE2-211ENST00000553801 SCN5AQ14524 2016 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 A6NJR5 290 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 RPS6P62753 249 aaKnown RBP20.85■□□□□ 0.93
SYNE2-211ENST00000553801 TFF2Q03403 129 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms