RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 MTA3Q9BTC8 594 aa27.4■■□□□ 1.98
TDP1-205ENST00000553527 RIOX1Q9H6W3 641 aa27.4■■□□□ 1.98
TDP1-205ENST00000553527 PCDH10Q9P2E7 1040 aa27.4■■□□□ 1.98
TDP1-205ENST00000553527 COLQQ9Y215 455 aaPredicted RBP27.4■■□□□ 1.98
TDP1-205ENST00000553527 CYTH3O43739 400 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 PPP1R11O60927 126 aaPredicted RBP27.39■■□□□ 1.98
TDP1-205ENST00000553527 ADAMTS4O75173 837 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 C6orf222P0C671 652 aaPredicted RBP27.39■■□□□ 1.98
TDP1-205ENST00000553527 SLC39A5Q6ZMH5 540 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 MCF2L2Q86YR7 1114 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 MTMR8Q96EF0 704 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 PCDHA1Q9Y5I3 950 aa27.39■■□□□ 1.98
TDP1-205ENST00000553527 MYADML2A6NDP7 307 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 EIF5BO60841 1220 aaKnown RBP27.38■■□□□ 1.97
TDP1-205ENST00000553527 DDAH1O94760 285 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 CFBP00751 764 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 RGS22Q8NE09 1264 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 SPC25Q9HBM1 224 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 ATP11BQ9Y2G3 1177 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 SLC12A7Q9Y666 1083 aa27.38■■□□□ 1.97
TDP1-205ENST00000553527 LRRC37A2A6NM11 1700 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 PTGS1P23219 599 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 KIF5BP33176 963 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 LIFRP42702 1097 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 PDE4DQ08499 809 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 KCNA10Q16322 511 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 C8orf34Q49A92 452 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 TMEM63BQ5T3F8 832 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 TAPT1Q6NXT6 567 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 CMTR1Q8N1G2 835 aaKnown RBP27.37■■□□□ 1.97
TDP1-205ENST00000553527 TAAR1Q96RJ0 339 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 MPHOSPH6Q99547 160 aaKnown RBP27.37■■□□□ 1.97
TDP1-205ENST00000553527 PHF24Q9UPV7 400 aa27.37■■□□□ 1.97
TDP1-205ENST00000553527 RTP1P59025 263 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 KRT32Q14532 448 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 TSGA10IPQ3SY00 556 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 DHX32Q7L7V1 743 aaKnown RBP27.36■■□□□ 1.97
TDP1-205ENST00000553527 DNERQ8NFT8 737 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 SYTL5Q8TDW5 730 aaPredicted RBP27.36■■□□□ 1.97
TDP1-205ENST00000553527 MORC4Q8TE76 937 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 VTA1Q9NP79 307 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 COL20A1Q9P218 1284 aa27.36■■□□□ 1.97
TDP1-205ENST00000553527 PNMA6FA0A0J9YX94 578 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 SMPD1P17405 629 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 GNASQ5JWF2 1037 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 IQSEC1Q6DN90 963 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 KLHDC9Q8NEP7 349 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 MAP3K14Q99558 947 aa27.35■■□□□ 1.97
TDP1-205ENST00000553527 A0A1W2PQ45 241 aaPredicted RBP27.34■■□□□ 1.97
TDP1-205ENST00000553527 A0A1W2PQY0 241 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 B4DLN1 442 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 DYNC1LI2O43237 492 aaPredicted RBP27.34■■□□□ 1.97
TDP1-205ENST00000553527 PLEKHA8P1O95397 391 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 CALM1P0DP23 149 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 CALM2P0DP24 149 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 CALM3P0DP25 149 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 CPA1P15085 419 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 MRPL12P52815 198 aaKnown RBP27.34■■□□□ 1.97
TDP1-205ENST00000553527 ACLYP53396 1101 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 GJA9P57773 515 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 BEX3Q00994 111 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 EXOSC10Q01780 885 aaKnown RBP27.34■■□□□ 1.97
TDP1-205ENST00000553527 SYNE3Q6ZMZ3 975 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 CCDC82Q8N4S0 544 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 VTI1AQ96AJ9 217 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 AP5M1Q9H0R1 490 aa27.34■■□□□ 1.97
TDP1-205ENST00000553527 HSPA4P34932 840 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 FGD1P98174 961 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 TRIM60Q495X7 471 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 TLK2Q86UE8 772 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 MICU3Q86XE3 530 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 RRP36Q96EU6 259 aaKnown RBP27.33■■□□□ 1.97
TDP1-205ENST00000553527 JAKMIP1Q96N16 626 aaKnown RBP27.33■■□□□ 1.97
TDP1-205ENST00000553527 RMDN3Q96TC7 470 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 TSEN34Q9BSV6 310 aaKnown RBP27.33■■□□□ 1.97
TDP1-205ENST00000553527 WDR11Q9BZH6 1224 aa27.33■■□□□ 1.97
TDP1-205ENST00000553527 GNEQ9Y223 722 aaKnown RBP27.33■■□□□ 1.97
TDP1-205ENST00000553527 LOC102724159A0A0B4J2E5 919 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 OPLAHO14841 1288 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 EPB41L2O43491 1005 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 ASGR1P07306 291 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 HOXA13P31271 388 aaPredicted RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 GNAQP50148 359 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 PWP2Q15269 919 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 HABP4Q5JVS0 413 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 ARHGEF16Q5VV41 709 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 SRBD1Q8N5C6 995 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 FANCBQ8NB91 859 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 NSUN6Q8TEA1 469 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 UPF3AQ9H1J1 476 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 STARD7Q9NQZ5 370 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 RBM27Q9P2N5 1060 aaKnown RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 NAP1L2Q9ULW6 460 aaPredicted RBP27.32■■□□□ 1.96
TDP1-205ENST00000553527 SNX14Q9Y5W7 946 aa27.32■■□□□ 1.96
TDP1-205ENST00000553527 EIF2AK2P19525 551 aaKnown RBP27.31■■□□□ 1.96
TDP1-205ENST00000553527 TRAF1Q13077 416 aa27.31■■□□□ 1.96
TDP1-205ENST00000553527 CCSAPQ6IQ19 270 aaPredicted RBP27.31■■□□□ 1.96
TDP1-205ENST00000553527 PCSK9Q8NBP7 692 aaKnown RBP27.31■■□□□ 1.96
TDP1-205ENST00000553527 LZTS2Q9BRK4 669 aa27.31■■□□□ 1.96
TDP1-205ENST00000553527 SPZ1Q9BXG8 430 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms