RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 MYH7P12883 1935 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 GREB1LQ9C091 1923 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 SEPT4O43236 478 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 FOSL2P15408 326 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ITGB8P26012 769 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ADORA2AP29274 412 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 SOX11P35716 441 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ZAP70P43403 619 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 FAM47AQ5JRC9 791 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 TTC39AQ5SRH9 613 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ANO1Q5XXA6 986 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ATF7IPQ6VMQ6 1270 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 USP38Q8NB14 1042 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 MOV10L1Q9BXT6 1211 aaKnown RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 RPAP3Q9H6T3 665 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 PRDM5Q9NQX1 630 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
ATXN3-219ENST00000553488 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
ATXN3-219ENST00000553488 A0A1W2PRG0 241 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 WIPF1O43516 503 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 COBLO75128 1261 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 GNAI2P04899 355 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 TRIM27P14373 513 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 EPHB4P54760 987 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 GABPAQ06546 454 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATXN3-219ENST00000553488 RAB3GAP1Q15042 981 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 LRRC41Q15345 812 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 ABCB5Q2M3G0 1257 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
ATXN3-219ENST00000553488 MIGA1Q8NAN2 632 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 ARRDC4Q8NCT1 418 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 SHCBP1Q8NEM2 672 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 ALG2Q9H553 416 aa8.87□□□□□ -0.99
ATXN3-219ENST00000553488 ERCC3P19447 782 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 CYP7A1P22680 504 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 ADCYAP1R1P41586 468 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 PLCD1P51178 756 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 SEPT2Q15019 361 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-219ENST00000553488 KIAA1755Q5JYT7 1200 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 CCDC158Q5M9N0 1113 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 CERS3Q8IU89 383 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 SSH3Q8TE77 659 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 MAML3Q96JK9 1138 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 RIOK1Q9BRS2 568 aaKnown RBP8.86□□□□□ -0.99
ATXN3-219ENST00000553488 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
ATXN3-219ENST00000553488 LRRC37A2A6NM11 1700 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 KIAA0355O15063 1070 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 STRNO43815 780 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 CLTBP09497 229 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 USP5P45974 858 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-219ENST00000553488 TLE2Q04725 743 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 PRAMEF19Q5SWL8 479 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 DPP9Q86TI2 863 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 ABRAQ8N0Z2 381 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 MAGEB6Q8N7X4 407 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 FERMT2Q96AC1 680 aa8.85□□□□□ -0.99
ATXN3-219ENST00000553488 RNPC3Q96LT9 517 aaKnown RBP8.85□□□□□ -0.99
ATXN3-219ENST00000553488 MYH4Q9Y623 1939 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 A0A1W2PQ45 241 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-219ENST00000553488 A0A1W2PQY0 241 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 FIGNL2A6NMB9 653 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 IDH1O75874 414 aaKnown RBP8.84□□□□□ -0.99
ATXN3-219ENST00000553488 COG2Q14746 738 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 GRIN2CQ14957 1233 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 MB21D1Q8N884 522 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 EAF2Q96CJ1 260 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-219ENST00000553488 TANGO6Q9C0B7 1094 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 ANTXR1Q9H6X2 564 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 NRBP1Q9UHY1 535 aa8.84□□□□□ -0.99
ATXN3-219ENST00000553488 TCF20Q9UGU0 1960 aaKnown RBP8.83□□□□□ -1
ATXN3-219ENST00000553488 A0A1W2PRU2 124 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 SLC35F4A4IF30 521 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 PPFIA3O75145 1194 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 ADAMTS4O75173 837 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 GPC1P35052 558 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 PTSQ03393 145 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 TMED8Q6PL24 325 aaPredicted RBP8.83□□□□□ -1
ATXN3-219ENST00000553488 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 CLEC10AQ8IUN9 316 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 SIAH1Q8IUQ4 282 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 LENG1Q96BZ8 264 aaPredicted RBP8.83□□□□□ -1
ATXN3-219ENST00000553488 ATG4CQ96DT6 458 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 MROH8Q9H579 483 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 XPNPEP3Q9NQH7 507 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 HOXC10Q9NYD6 342 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 NOP58Q9Y2X3 529 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms