RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 XRCC5P13010 732 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 KCTD2Q14681 263 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 CTU1Q7Z7A3 348 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 NUDT12Q9BQG2 462 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 PFASO15067 1338 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 BRCA2P51587 3418 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 PRMT2P55345 433 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 APBA2Q99767 749 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 FLRT1Q9NZU1 646 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 PTPN22Q9Y2R2 807 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 IVNS1ABPQ9Y6Y0 642 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
MTHFD1-204ENST00000553405 M0R2N6 131 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 RGS2P41220 211 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 NAPAP54920 295 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 AKAP17AQ02040 695 aaKnown RBP17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 CCL14Q16627 93 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
MTHFD1-204ENST00000553405 CYP2B6P20813 491 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 HOXD10P28358 340 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 ARHGEF6Q15052 776 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 MORC4Q8TE76 937 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 TRIB2Q92519 343 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 INTS4Q96HW7 963 aaKnown RBP17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 MAML3Q96JK9 1138 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
MTHFD1-204ENST00000553405 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 CFBP00751 764 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 EDNRBP24530 442 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 UBE2SQ16763 222 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 DAGLBQ8NCG7 672 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 PXYLP1Q8TE99 480 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 TAAR1Q96RJ0 339 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 MCM3APO60318 1980 aa17.07■□□□□ 0.32
MTHFD1-204ENST00000553405 CALML3P27482 149 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 ADCY7P51828 1080 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 DPP9Q86TI2 863 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 CRYGNQ8WXF5 182 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 WASF1Q92558 559 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 CUL5Q93034 780 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 KATNBL1Q9H079 304 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
MTHFD1-204ENST00000553405 EDIL3O43854 480 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 ADCY3O60266 1144 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 ELNP15502 786 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 GJB2P29033 226 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 TRIM32Q13049 653 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 MAP3K21Q5TCX8 1036 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 FBXO46Q6PJ61 603 aaPredicted RBP17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 DNERQ8NFT8 737 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 CCDC12Q8WUD4 166 aaPredicted RBP17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 PCDHA4Q9UN74 947 aa17.05■□□□□ 0.32
MTHFD1-204ENST00000553405 LOC102724159A0A0B4J2E5 919 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 PWP2Q15269 919 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 KRT40Q6A162 431 aa17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
MTHFD1-204ENST00000553405 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms