RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MCF2L2Q86YR7 1114 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-207ENST00000553290 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 TOX2Q96NM4 488 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 AP5M1Q9H0R1 490 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 VAT1LQ9HCJ6 419 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 PRDM5Q9NQX1 630 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-207ENST00000553290 PDGFCQ9NRA1 345 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 MRPL11Q9Y3B7 192 aaKnown RBP15.1■□□□□ 0.01
ACTN1-207ENST00000553290 TAF6LQ9Y6J9 622 aa15.1■□□□□ 0.01
ACTN1-207ENST00000553290 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
ACTN1-207ENST00000553290 LTBP2Q14767 1821 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-207ENST00000553290 DCDC2CA8MYV0 355 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 CTAGE5O15320 804 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 ZEB2O60315 1214 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 CLTBP09497 229 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 SMPD1P17405 629 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 PDE4DQ08499 809 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 LRIT3Q3SXY7 679 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 ANKRD33Q7Z3H0 272 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 VTI1AQ96AJ9 217 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
ACTN1-207ENST00000553290 MROH7Q68CQ1 1323 aa15.09■□□□□ 0.01
ACTN1-207ENST00000553290 A0A0U1RQG5 324 aaPredicted RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 ZBTB5O15062 677 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 CABYRO75952 493 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 EDNRBP24530 442 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 IRX5P78411 483 aaPredicted RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 TRAF1Q13077 416 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 GRM4Q14833 912 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 FSCN1Q16658 493 aaKnown RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 DUSP28Q4G0W2 176 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 TMEM67Q5HYA8 995 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 SH3RF1Q7Z6J0 888 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 MB21D2Q8IYB1 491 aaPredicted RBP15.08■□□□□ 0
ACTN1-207ENST00000553290 IGDCC4Q8TDY8 1250 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 MTMR8Q96EF0 704 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 MTA3Q9BTC8 594 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 AMNQ9BXJ7 453 aa15.08■□□□□ 0
ACTN1-207ENST00000553290 LAMA3Q16787 3333 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 RBM47A0AV96 593 aaKnown RBP15.07■□□□□ 0
ACTN1-207ENST00000553290 TRIM43BA6NCK2 446 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 SOX1O00570 391 aaPredicted RBP15.07■□□□□ 0
ACTN1-207ENST00000553290 KIAA0355O15063 1070 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 CDK7P50613 346 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 ANTXR2P58335 489 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 BEX3Q00994 111 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 CASC1Q6TDU7 716 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 CHST3Q7LGC8 479 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 CATIPQ7Z7H3 387 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 TRIM43Q96BQ3 446 aaPredicted RBP15.07■□□□□ 0
ACTN1-207ENST00000553290 WDR11Q9BZH6 1224 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 RIOX1Q9H6W3 641 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 SENP2Q9HC62 589 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 TMEM39AQ9NV64 488 aa15.07■□□□□ 0
ACTN1-207ENST00000553290 SZT2Q5T011 3432 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 ARVCFO00192 962 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 SLC27A2O14975 620 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 0
ACTN1-207ENST00000553290 FAAP100Q0VG06 881 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 TROAPQ12815 778 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 NECTIN1Q15223 517 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 GPR153Q6NV75 609 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 TMTC2Q8N394 836 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 SAMD3Q8N6K7 520 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 SYTL5Q8TDW5 730 aaPredicted RBP15.06■□□□□ 0
ACTN1-207ENST00000553290 NSUN6Q8TEA1 469 aaKnown RBP15.06■□□□□ 0
ACTN1-207ENST00000553290 SCFD2Q8WU76 684 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 TBC1D5Q92609 795 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 BADQ92934 168 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 SEZ6LQ9BYH1 1024 aa15.06■□□□□ 0
ACTN1-207ENST00000553290 MAP3K20Q9NYL2 800 aaKnown RBP15.06■□□□□ 0
ACTN1-207ENST00000553290 RAG1P15918 1043 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 MCM5P33992 734 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 PPP2R5BQ15173 497 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 CREB3L3Q68CJ9 461 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 CXCL17Q6UXB2 119 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 SKAP1Q86WV1 359 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 LRCH3Q96II8 777 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 TMEM87BQ96K49 555 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 TAAR1Q96RJ0 339 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 IWS1Q96ST2 819 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 MAP3K14Q99558 947 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 LY9Q9HBG7 655 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 PCDHA1Q9Y5I3 950 aa15.05■□□□□ -0
ACTN1-207ENST00000553290 TLR3O15455 904 aaKnown RBP15.04■□□□□ -0
ACTN1-207ENST00000553290 PRC1O43663 620 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 DDAH1O94760 285 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 CFBP00751 764 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 CPT1AP50416 773 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 HSD17B4P51659 736 aa15.04■□□□□ -0
ACTN1-207ENST00000553290 GHRHRQ02643 423 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms