RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 EPB41L4AQ9HCS5 686 aaPredicted RBP10.14□□□□□ -0.79
CDK4-213ENST00000552713 RNF146Q9NTX7 359 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 ARPP21Q9UBL0 812 aaPredicted RBP10.14□□□□□ -0.79
CDK4-213ENST00000552713 HCN4Q9Y3Q4 1203 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 ARIH1Q9Y4X5 557 aaPredicted RBP10.14□□□□□ -0.79
CDK4-213ENST00000552713 TNKSO95271 1327 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 ASB14A6NK59 587 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 TMEM232C9JQI7 657 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
CDK4-213ENST00000552713 SLFN13Q68D06 897 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 TMCO2Q7Z6W1 182 aaPredicted RBP10.13□□□□□ -0.79
CDK4-213ENST00000552713 DDRGK1Q96HY6 314 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 TRERF1Q96PN7 1200 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 MTMR4Q9NYA4 1195 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 COG5Q9UP83 839 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 PIEZO1Q92508 2521 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 KIAA1217Q5T5P2 1943 aa10.13□□□□□ -0.79
CDK4-213ENST00000552713 LCHNA4D1U4 455 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 ZEB2O60315 1214 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 GPR37L1O60883 481 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 BMP3P12645 472 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 ALAS1P13196 640 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 IQSEC1Q6DN90 963 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
CDK4-213ENST00000552713 HERC6Q8IVU3 1022 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 HLA-CQ95604 372 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 OSBP2Q969R2 916 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 CYP39A1Q9NYL5 469 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 Q9Y3F1 56 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 MICAL3Q7RTP6 2002 aa10.12□□□□□ -0.79
CDK4-213ENST00000552713 NLRC5Q86WI3 1866 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 ZNF318Q5VUA4 2279 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 PI4K2BG5E9Z4 385 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
CDK4-213ENST00000552713 TTLL1O95922 423 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 PFKMP08237 780 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 MYL3P08590 195 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 IQCF3P0C7M6 154 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 PURAQ00577 322 aaKnown RBP10.11□□□□□ -0.79
CDK4-213ENST00000552713 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
CDK4-213ENST00000552713 MORC4Q8TE76 937 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 GDPD5Q8WTR4 605 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 SLC9A7Q96T83 725 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 SEZ6LQ9BYH1 1024 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 ISY1Q9ULR0 285 aaKnown RBP10.11□□□□□ -0.79
CDK4-213ENST00000552713 MYH6P13533 1939 aa10.11□□□□□ -0.79
CDK4-213ENST00000552713 M0R2C6 588 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 MCCP23508 829 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 STAT2P52630 851 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 GPNMBQ14956 572 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 TCTN1Q2MV58 587 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 DUSP28Q4G0W2 176 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CDK4-213ENST00000552713 NSMFQ6X4W1 530 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 KCTD1Q719H9 257 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
CDK4-213ENST00000552713 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 STAG1Q8WVM7 1258 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 COPS5Q92905 334 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 VTA1Q9NP79 307 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 PLIN4Q96Q06 1357 aa10.1□□□□□ -0.79
CDK4-213ENST00000552713 GPAA1O43292 621 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 NMT2O60551 498 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 RAB11FIP3O75154 756 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 ACTN1P12814 892 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 SLC1A4P43007 532 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 DEFB103AP81534 67 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 IKQ13123 557 aaPredicted RBP10.09□□□□□ -0.79
CDK4-213ENST00000552713 TKFCQ3LXA3 575 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 FAM47CQ5HY64 1035 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 PHOSPHO2Q8TCD6 241 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 CTAGE1Q96RT6 745 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 WDR11Q9BZH6 1224 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 FTOQ9C0B1 505 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDK4-213ENST00000552713 INCENPQ9NQS7 918 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 SYNPO2Q9UMS6 1093 aa10.09□□□□□ -0.79
CDK4-213ENST00000552713 RBM47A0AV96 593 aaKnown RBP10.08□□□□□ -0.8
CDK4-213ENST00000552713 CCER2I3L3R5 266 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 NFIBO00712 420 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 TSPY3P0CV98 308 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 TSPY8P0CW00 308 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 FDX1P10109 184 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 TDO2P48775 406 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 ALDH5A1P51649 535 aaPredicted RBP10.08□□□□□ -0.8
CDK4-213ENST00000552713 WDR5P61964 334 aaKnown RBP10.08□□□□□ -0.8
CDK4-213ENST00000552713 TFAP4Q01664 338 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 BAATQ14032 418 aaPredicted RBP10.08□□□□□ -0.8
CDK4-213ENST00000552713 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 FAM160B2Q86V87 743 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 IFNL3Q8IZI9 196 aa10.08□□□□□ -0.8
CDK4-213ENST00000552713 OR6J1Q8NGC5 347 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms