RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 CDC45O75419 566 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 SLC34A2O95436 690 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 ASGR1P07306 291 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 MCM5P33992 734 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 TLE2Q04725 743 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 GRM4Q14833 912 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 CCSAPQ6IQ19 270 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-215ENST00000552374 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 TAAR1Q96RJ0 339 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
TMEM116-215ENST00000552374 AMNQ9BXJ7 453 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 VTA1Q9NP79 307 aa12.7□□□□□ -0.38
TMEM116-215ENST00000552374 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
TMEM116-215ENST00000552374 B4DLN1 442 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 ZBTB5O15062 677 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
TMEM116-215ENST00000552374 CFBP00751 764 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 BMP8BP34820 402 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
TMEM116-215ENST00000552374 TROAPQ12815 778 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 RNF20Q5VTR2 975 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 SYTL5Q8TDW5 730 aaPredicted RBP12.69□□□□□ -0.38
TMEM116-215ENST00000552374 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 PIGSQ96S52 555 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 MYL10Q9BUA6 226 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
TMEM116-215ENST00000552374 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 PCDHA1Q9Y5I3 950 aa12.69□□□□□ -0.38
TMEM116-215ENST00000552374 LAMA3Q16787 3333 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-215ENST00000552374 COL9A3Q14050 684 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-215ENST00000552374 SNX17Q15036 470 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
TMEM116-215ENST00000552374 C1orf53Q5VUE5 145 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 NSUN6Q8TEA1 469 aaKnown RBP12.68□□□□□ -0.38
TMEM116-215ENST00000552374 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 TMEM87BQ96K49 555 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
TMEM116-215ENST00000552374 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 CTAGE5O15320 804 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 CYTH3O43739 400 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 ZEB2O60315 1214 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-215ENST00000552374 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
TMEM116-215ENST00000552374 SLC35G1Q2M3R5 365 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-215ENST00000552374 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-215ENST00000552374 TMEM39AQ9NV64 488 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 Q9Y3F1 56 aa12.67□□□□□ -0.38
TMEM116-215ENST00000552374 ELP1O95163 1332 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
TMEM116-215ENST00000552374 CLTBP09497 229 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 RXRAP19793 462 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 EDNRBP24530 442 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 KIF5BP33176 963 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 BADQ92934 168 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 MTA3Q9BTC8 594 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 MAF1Q9H063 256 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 PDLIM7Q9NR12 457 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
TMEM116-215ENST00000552374 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 RBM47A0AV96 593 aaKnown RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 ARVCFO00192 962 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 DDAH1O94760 285 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 EIF2AK2P19525 551 aaKnown RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-215ENST00000552374 NKX3-2P78367 333 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 FAAP100Q0VG06 881 aa12.65□□□□□ -0.38
TMEM116-215ENST00000552374 TRAF1Q13077 416 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms