RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 AKR1A1P14550 325 aa21.39■■□□□ 1.01
PRPF40B-216ENST00000552301 MRPL12P52815 198 aaKnown RBP21.39■■□□□ 1.01
PRPF40B-216ENST00000552301 APOBRQ0VD83 1088 aa21.39■■□□□ 1.01
PRPF40B-216ENST00000552301 ZSWIM6Q9HCJ5 1215 aa21.39■■□□□ 1.01
PRPF40B-216ENST00000552301 LOC102724159A0A0B4J2E5 919 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 PPP1R11O60927 126 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 CFBP00751 764 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 RARBP10826 455 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 METAP2P50579 478 aaKnown RBP eCLIP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 ALDH5A1P51649 535 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 ANAPC15P60006 121 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 ACVR2BQ13705 512 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 PWP2Q15269 919 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 ANO1Q5XXA6 986 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 LHX8Q68G74 356 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 CMTR1Q8N1G2 835 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 CCDC82Q8N4S0 544 aa21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 SRBD1Q8N5C6 995 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 UPF3BQ9BZI7 483 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-216ENST00000552301 FRMPD3Q5JV73 1810 aa21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 CCDC196A0A1B0GTZ2 297 aa21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 ZNF865P0CJ78 1059 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 DNERQ8NFT8 737 aa21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 PURBQ96QR8 312 aaKnown RBP21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 FAM184BQ9ULE4 1060 aa21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 LCTP09848 1927 aa21.37■■□□□ 1.01
PRPF40B-216ENST00000552301 MYCNP04198 464 aaPredicted RBP21.36■■□□□ 1.01
PRPF40B-216ENST00000552301 PPP2R5BQ15173 497 aa21.36■■□□□ 1.01
PRPF40B-216ENST00000552301 NECAB2Q7Z6G3 386 aa21.36■■□□□ 1.01
PRPF40B-216ENST00000552301 FBXL16Q8N461 479 aa21.36■■□□□ 1.01
PRPF40B-216ENST00000552301 SYTL5Q8TDW5 730 aaPredicted RBP21.36■■□□□ 1.01
PRPF40B-216ENST00000552301 ASTN1O14525 1302 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 PDE4DQ08499 809 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 SAMD3Q8N6K7 520 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 ARRDC4Q8NCT1 418 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 PAWRQ96IZ0 340 aaKnown RBP21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 HTATIP2Q9BUP3 242 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 AGXT2Q9BYV1 514 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 PDRG1Q9NUG6 133 aa21.35■■□□□ 1.01
PRPF40B-216ENST00000552301 PDE4DIPQ5VU43 2346 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 CNTNAP5Q8WYK1 1306 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 NOL8Q76FK4 1167 aaKnown RBP21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 EEPD1Q7L9B9 569 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 FBXO16Q8IX29 292 aaPredicted RBP21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 NSUN6Q8TEA1 469 aaKnown RBP21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 DIS3LQ8TF46 1054 aaKnown RBP21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 TBC1D5Q92609 795 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 VTA1Q9NP79 307 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 XPNPEP3Q9NQH7 507 aa21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 MAP3K20Q9NYL2 800 aaKnown RBP21.34■■□□□ 1.01
PRPF40B-216ENST00000552301 KBTBD13C9JR72 458 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 POLR2MP0CAP2 368 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 HSD17B4P51659 736 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 CCDC144BQ3MJ40 725 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 C8orf34Q49A92 452 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 CUL5Q93034 780 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 RMDN3Q96TC7 470 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 C11orf49Q9H6J7 331 aa21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 DDX49Q9Y6V7 483 aaKnown RBP21.33■■□□□ 1.01
PRPF40B-216ENST00000552301 hCG_1642624A0A1W2PR95 340 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 DNM1LO00429 736 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 SEC24BO95487 1268 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 ARHGEF16Q5VV41 709 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 HEATR3Q7Z4Q2 680 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 UBE2Q1Q7Z7E8 422 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 MORC4Q8TE76 937 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 SPC25Q9HBM1 224 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 LRRC37A2A6NM11 1700 aa21.32■■□□□ 1
PRPF40B-216ENST00000552301 OPLAHO14841 1288 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 DUSP11O75319 330 aaKnown RBP21.31■■□□□ 1
PRPF40B-216ENST00000552301 CDC27P30260 824 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 HOXA13P31271 388 aaPredicted RBP21.31■■□□□ 1
PRPF40B-216ENST00000552301 GHRHRQ02643 423 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
PRPF40B-216ENST00000552301 RNF180Q86T96 592 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 LENG1Q96BZ8 264 aaPredicted RBP21.31■■□□□ 1
PRPF40B-216ENST00000552301 TAAR1Q96RJ0 339 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 KATNBL1Q9H079 304 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 COL20A1Q9P218 1284 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 NID2Q14112 1375 aa21.31■■□□□ 1
PRPF40B-216ENST00000552301 PGK1P00558 417 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 EIF2AK2P19525 551 aaKnown RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 ADD1P35611 737 aaKnown RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 ADCYAP1R1P41586 468 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 AKAP17AQ02040 695 aaKnown RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 TNFAIP2Q03169 654 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 GJC2Q5T442 439 aaPredicted RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 FCHSD1Q86WN1 690 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 IWS1Q96ST2 819 aa21.3■■□□□ 1
PRPF40B-216ENST00000552301 FAM217BQ9NTX9 383 aaPredicted RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 V9GY48 417 aaPredicted RBP21.3■■□□□ 1
PRPF40B-216ENST00000552301 EDNRBP24530 442 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 PDIA3P30101 505 aaKnown RBP21.29■■□□□ 1
PRPF40B-216ENST00000552301 EVCP57679 992 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
PRPF40B-216ENST00000552301 ANKRD1Q15327 319 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms