RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CNPY2Q9Y2B0 182 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
CCDC65-204ENST00000552188 RIPK3Q9Y572 518 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 MYH7BA7E2Y1 1941 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PFASO15067 1338 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 POTEMA6NI47 508 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 CCDC69A6NI79 296 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 ICAM1P05362 532 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 MCM5P33992 734 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 NOVP48745 357 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 FGD1P98174 961 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PROX2Q3B8N5 592 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 POTEGQ6S5H5 508 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 NSMFQ6X4W1 530 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 SYNE3Q6ZMZ3 975 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 CYB5R4Q7L1T6 521 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 CHST3Q7LGC8 479 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
CCDC65-204ENST00000552188 ARRDC4Q8NCT1 418 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 ANKS1AQ92625 1134 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
CCDC65-204ENST00000552188 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 LSG1Q9H089 658 aaKnown RBP6.88□□□□□ -1.31
CCDC65-204ENST00000552188 RANBP17Q9H2T7 1088 aaKnown RBP6.88□□□□□ -1.31
CCDC65-204ENST00000552188 FLRT1Q9NZU1 646 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 DDX20Q9UHI6 824 aaKnown RBP6.88□□□□□ -1.31
CCDC65-204ENST00000552188 KIAA1217Q5T5P2 1943 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
CCDC65-204ENST00000552188 B4DLN1 442 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 KBTBD13C9JR72 458 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 SLC27A2O14975 620 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 SEPT4O43236 478 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 PRC1O43663 620 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 REC8O95072 547 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 SNHG28P0DPA3 235 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 RARBP10826 455 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 MRPL12P52815 198 aaKnown RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 TRAF1Q13077 416 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 KRT32Q14532 448 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 ZNF792Q3KQV3 632 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 USH1GQ495M9 461 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 PRAMEF19Q5SWL8 479 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 MAP3K21Q5TCX8 1036 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 ANO1Q5XXA6 986 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 NOL8Q76FK4 1167 aaKnown RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 TMTC2Q8N394 836 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 CTCFLQ8NI51 663 aaPredicted RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 SHISA4Q96DD7 197 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 TMEM87BQ96K49 555 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 NEK1Q96PY6 1258 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 C11orf49Q9H6J7 331 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 ADD3Q9UEY8 706 aaKnown RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 ZHX1Q9UKY1 873 aaPredicted RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 FAM184BQ9ULE4 1060 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 NAP1L2Q9ULW6 460 aaPredicted RBP6.87□□□□□ -1.31
CCDC65-204ENST00000552188 NR2E3Q9Y5X4 410 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 LCTP09848 1927 aa6.87□□□□□ -1.31
CCDC65-204ENST00000552188 BAZ2BQ9UIF8 2168 aaKnown RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 ZNF536O15090 1300 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 ABCB11O95342 1321 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 ASB14A6NK59 587 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 KLRF2D3W0D1 207 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 CYBAP13498 195 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 AKR1A1P14550 325 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 CALML3P27482 149 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 KIF5BP33176 963 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 PRSS12P56730 875 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 NECTIN1Q15223 517 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 SEC23AQ15436 765 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 CDC37Q16543 378 aaPredicted RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 RNF207Q6ZRF8 634 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 MCF2L2Q86YR7 1114 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 ADGRF4Q8IZF3 695 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 SPC25Q9HBM1 224 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 A1CFQ9NQ94 594 aaKnown RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 NRBP1Q9UHY1 535 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 OGDHLQ9ULD0 1010 aa6.86□□□□□ -1.31
CCDC65-204ENST00000552188 MRPL11Q9Y3B7 192 aaKnown RBP6.86□□□□□ -1.31
CCDC65-204ENST00000552188 LRRC37A2A6NM11 1700 aa6.85□□□□□ -1.31
CCDC65-204ENST00000552188 WDR19Q8NEZ3 1342 aa6.85□□□□□ -1.31
CCDC65-204ENST00000552188 DNAJC25-GNG10A0A024R161 153 aa6.85□□□□□ -1.31
CCDC65-204ENST00000552188 HMGB1P09429 215 aaKnown RBP6.85□□□□□ -1.31
CCDC65-204ENST00000552188 CALM1P0DP23 149 aa6.85□□□□□ -1.31
CCDC65-204ENST00000552188 CALM2P0DP24 149 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms