RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 PEX10O60683 326 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 CNMDO75829 334 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 HOXC6P09630 235 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 COL6A1P12109 1028 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 SCG2P13521 617 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 STAT2P52630 851 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 NUCB2P80303 420 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 LHX8Q68G74 356 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 SH3GLB2Q9NR46 395 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 PRR12Q9ULL5 1215 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 MTMR6Q9Y217 621 aa13.95□□□□□ -0.18
ERBB3-216ENST00000550869 PFASO15067 1338 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 LAMA2P24043 3122 aaKnown RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 SMCHD1A6NHR9 2005 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 ZBTB5O15062 677 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 PTPREP23469 700 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 PIGSQ96S52 555 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 RPAP3Q9H6T3 665 aaPredicted RBP13.94□□□□□ -0.18
ERBB3-216ENST00000550869 FBXO28Q9NVF7 368 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
ERBB3-216ENST00000550869 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-216ENST00000550869 hCG_1984214I3L0E3 225 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 RAD21O60216 631 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-216ENST00000550869 FDX1P10109 184 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 GRB14Q14449 540 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 NPY5RQ15761 445 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 CCL14Q16627 93 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 ZNF713Q8N859 430 aaPredicted RBP13.93□□□□□ -0.18
ERBB3-216ENST00000550869 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
ERBB3-216ENST00000550869 STXBP3O00186 592 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 STRNO43815 780 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 CCND3P30281 292 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-216ENST00000550869 DSG3P32926 999 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 MAGEA10P43363 369 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-216ENST00000550869 COG2Q14746 738 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-216ENST00000550869 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 KRT40Q6A162 431 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 WWC2Q6AWC2 1192 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 TDHQ8IZJ6 230 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 REPS2Q8NFH8 660 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 PHF20Q9BVI0 1012 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 SLC38A10Q9HBR0 1119 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 GJB4Q9NTQ9 266 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 ZMYND8Q9ULU4 1186 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-216ENST00000550869 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
ERBB3-216ENST00000550869 ZNF536O15090 1300 aa13.91□□□□□ -0.18
ERBB3-216ENST00000550869 ESYT2A0FGR8 921 aa13.91□□□□□ -0.18
ERBB3-216ENST00000550869 SOX1O00570 391 aaPredicted RBP13.91□□□□□ -0.18
ERBB3-216ENST00000550869 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
ERBB3-216ENST00000550869 SHCBP1Q8NEM2 672 aa13.91□□□□□ -0.18
ERBB3-216ENST00000550869 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
ERBB3-216ENST00000550869 BTBD7Q9P203 1132 aa13.91□□□□□ -0.18
ERBB3-216ENST00000550869 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
ERBB3-216ENST00000550869 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
ERBB3-216ENST00000550869 M0R2N6 131 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 VWA5AO00534 786 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 FLOT1O75955 427 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 IGHA2P01877 340 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 MMP1P03956 469 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 SYN1P17600 705 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 XBP1P17861 261 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.186e-13■□□□□ 10.9
ERBB3-216ENST00000550869 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 GALNT17Q6IS24 598 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 PPP1R18Q6NYC8 613 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 ABRAQ8N0Z2 381 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 DAGLBQ8NCG7 672 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 LRCH3Q96II8 777 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
ERBB3-216ENST00000550869 SPATC1LQ9H0A9 340 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 MROH8Q9H579 483 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 SLC5A4Q9NY91 659 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
ERBB3-216ENST00000550869 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-216ENST00000550869 H3BQV1 296 aa13.89□□□□□ -0.19
ERBB3-216ENST00000550869 DNM1LO00429 736 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms