RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 PCDHB10Q9UN67 800 aa8.22□□□□□ -1.09
GNPTAB-208ENST00000550718 C2orf71A6NGG8 1288 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 NFIXQ14938 502 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 CRACR2BQ8N4Y2 399 aaPredicted RBP8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 ZNF513Q8N8E2 541 aaPredicted RBP8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 NETO2Q8NC67 525 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 CXorf38Q8TB03 319 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 CPLX3Q8WVH0 158 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 TSPAN17Q96FV3 270 aa8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 KIAA1522Q9P206 1035 aaPredicted RBP8.21□□□□□ -1.1
GNPTAB-208ENST00000550718 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 NAT2P11245 290 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 NCAM1P13591 858 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 NCKAP1LP55160 1127 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 PRR5P85299 388 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 POMZP3Q6PJE2 187 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 LZTR1Q8N653 840 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 FGD4Q96M96 766 aa8.2□□□□□ -1.1
GNPTAB-208ENST00000550718 STXBP3O00186 592 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 FOXD2O60548 495 aaPredicted RBP8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 VAMP4O75379 141 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 PAMP19021 973 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 PPP2R5EQ16537 467 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 NUDT5Q9UKK9 219 aa8.19□□□□□ -1.1
GNPTAB-208ENST00000550718 ZBTB7AO95365 584 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 NCAPHQ15003 741 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 KIAA1211LQ6NV74 962 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 TP53I13Q8NBR0 393 aaPredicted RBP8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 CPA5Q8WXQ8 436 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 COPS5Q92905 334 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 PEX11GQ96HA9 241 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 MTA3Q9BTC8 594 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.18□□□□□ -1.17e-6■■■■□ 20.2
GNPTAB-208ENST00000550718 DBR1Q9UK59 544 aaKnown RBP8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 SUGT1Q9Y2Z0 365 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 EMC9Q9Y3B6 208 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 HCFC2Q9Y5Z7 792 aa8.18□□□□□ -1.1
GNPTAB-208ENST00000550718 NPHP3-ACAD11A0A0J9YXS1 232 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 ZC3H12DA2A288 527 aaKnown RBP8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 FFAR3O14843 346 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 SYN1P17600 705 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 TACR1P25103 407 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 HTRA3P83110 453 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 FOXO4P98177 505 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 C9orf131Q5VYM1 1079 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 FRMD5Q7Z6J6 570 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 B3GNT8Q7Z7M8 397 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 FAM169BQ8N8A8 192 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 MMP19Q99542 508 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 APBA2Q99767 749 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 INPP5FQ9Y2H2 1132 aa8.17□□□□□ -1.1
GNPTAB-208ENST00000550718 ATF2P15336 505 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 LIMS1P48059 325 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 DPY19L1Q2PZI1 675 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 VWA3BQ502W6 1294 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 LCE5AQ5TCM9 118 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 SAPCD2Q86UD0 394 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 BVESQ8NE79 360 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 FNIP1Q8TF40 1166 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 TEPSINQ96N21 525 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 AKT3Q9Y243 479 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 FAN1Q9Y2M0 1017 aa8.16□□□□□ -1.1
GNPTAB-208ENST00000550718 SH3D21A4FU49 640 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 NPHS1O60500 1241 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 ASGR2P07307 311 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 BUD31P41223 144 aaPredicted RBP8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 VMACQ2NL98 169 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 ERICH6BQ5W0A0 696 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 ACBD3Q9H3P7 528 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 CCSER2Q9H7U1 834 aa8.15□□□□□ -1.1
GNPTAB-208ENST00000550718 C7orf72A4D263 438 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 PPP1R11O60927 126 aaPredicted RBP8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 FEZF2Q8TBJ5 459 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 ALG3Q92685 438 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 KRTAP4-11Q9BYQ6 195 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 CYP26B1Q9NR63 512 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 APEX2Q9UBZ4 518 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 RWDD3Q9Y3V2 267 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 PMF1-BGLAPU3KQ54 211 aa8.14□□□□□ -1.11
GNPTAB-208ENST00000550718 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 KCNC1P48547 511 aa8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 CPNE8Q86YQ8 564 aa8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 FBLN5Q9UBX5 448 aa8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
GNPTAB-208ENST00000550718 SLURP1P55000 103 aa8.12□□□□□ -1.11
GNPTAB-208ENST00000550718 LIPIQ6XZB0 460 aa8.12□□□□□ -1.11
GNPTAB-208ENST00000550718 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
GNPTAB-208ENST00000550718 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
GNPTAB-208ENST00000550718 GULP1Q9UBP9 304 aa8.12□□□□□ -1.11
GNPTAB-208ENST00000550718 KCNH1O95259 989 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms