RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 BCL9LQ86UU0 1499 aa4.95□□□□□ -1.62
CCDC59-204ENST00000550589 MYH3P11055 1940 aa4.95□□□□□ -1.62
CCDC59-204ENST00000550589 KAT6BQ8WYB5 2073 aa4.95□□□□□ -1.62
CCDC59-204ENST00000550589 LAD1O00515 517 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 POLR2DO15514 142 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 AP5Z1O43299 807 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 TSPY3P0CV98 308 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 TSPY8P0CW00 308 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 SKIP12755 728 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 MECOMQ03112 1051 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 TROAPQ12815 778 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 GRAPQ13588 217 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 SEC23AQ15436 765 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 DPCR1Q3MIW9 517 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 NT5DC1Q5TFE4 455 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CEP135Q66GS9 1140 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 ARL6IP4Q66PJ3 421 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CTR9Q6PD62 1173 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 SHC4Q6S5L8 630 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 PRICKLE2Q7Z3G6 844 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 NBPF11Q86T75 865 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 DEPDC4Q8N2C3 294 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 ENAHQ8N8S7 591 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 IQUBQ8NA54 791 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CNBD1Q8NA66 436 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 GRAPLQ8TC17 118 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 TBC1D22AQ8WUA7 517 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CELF1Q92879 486 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 GLMNQ92990 594 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CCDC47Q96A33 483 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 GSDMAQ96QA5 445 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 FHDC1Q9C0D6 1143 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 KCNF1Q9H3M0 494 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 DCP1AQ9NPI6 582 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 RMND1Q9NWS8 449 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 AATFQ9NY61 560 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 USP21Q9UK80 565 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 IQSEC3Q9UPP2 1182 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 NUP98P52948 1817 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 SNAP23O00161 211 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 BIN1O00499 593 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 BBOX1O75936 387 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 MYL1P05976 194 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 SCG2P13521 617 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 ATP2B4P23634 1241 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 MARSP56192 900 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 FANCCQ00597 558 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CENPCQ03188 943 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 LONRF3Q496Y0 759 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 C15orf52Q6ZUT6 534 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 FCHSD1Q86WN1 690 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 ENOX1Q8TC92 643 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CACTINQ8WUQ7 758 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CNKSR1Q969H4 720 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 RBM17Q96I25 401 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 C16orf45Q96MC5 204 aaPredicted RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 PHF20Q9BVI0 1012 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 XPO4Q9C0E2 1151 aaKnown RBP4.94□□□□□ -1.62
CCDC59-204ENST00000550589 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 TCP11L1Q9NUJ3 509 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 IFNKQ9P0W0 207 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 PYCARDQ9ULZ3 195 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 KCNJ14Q9UNX9 436 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 PCDHA5Q9Y5H7 936 aa4.94□□□□□ -1.62
CCDC59-204ENST00000550589 CICQ96RK0 1608 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 TMEM229AB2RXF0 380 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 UBAP1LF5GYI3 381 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 hCG_1984214I3L0E3 225 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 MYCP01106 439 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SLFN14P0C7P3 912 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 VSIG8P0DPA2 414 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 RHOQP17081 205 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 LMOD1P29536 600 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 GNA11P29992 359 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 GPC1P35052 558 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 LONP1P36776 959 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 PPP1R2P41236 205 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SPAG1Q07617 926 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 PNOCQ13519 176 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 STIM1Q13586 685 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 NCOA4Q13772 614 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 PFKFB3Q16875 520 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SLC27A3Q5K4L6 730 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 MEX3CQ5U5Q3 659 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 TMTC3Q6ZXV5 915 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 LYSMD3Q7Z3D4 306 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 TMC6Q7Z403 805 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 HOMER1Q86YM7 354 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 STK11IPQ8N1F8 1099 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 CCDC155Q8N6L0 562 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 GPR161Q8N6U8 529 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ZNF713Q8N859 430 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 AIFM3Q96NN9 605 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SRRTQ9BXP5 876 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 CUEDC1Q9NWM3 386 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 NRBP1Q9UHY1 535 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 FBXO2Q9UK22 296 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SUGT1Q9Y2Z0 365 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 NWD2Q9ULI1 1742 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 COL16A1Q07092 1604 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms