RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SOX10P56693 466 aa26.05■■□□□ 1.76
BRF1-216ENST00000550208 ANKRD1Q15327 319 aa26.05■■□□□ 1.76
BRF1-216ENST00000550208 MAMDC4Q6UXC1 1216 aa26.05■■□□□ 1.76
BRF1-216ENST00000550208 HMX1Q9NP08 348 aaPredicted RBP26.05■■□□□ 1.76
BRF1-216ENST00000550208 POTEFA5A3E0 1075 aa26.04■■□□□ 1.76
BRF1-216ENST00000550208 NTRK3Q16288 839 aa26.04■■□□□ 1.76
BRF1-216ENST00000550208 NOL8Q76FK4 1167 aaKnown RBP26.04■■□□□ 1.76
BRF1-216ENST00000550208 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.04■■□□□ 1.76
BRF1-216ENST00000550208 DDX49Q9Y6V7 483 aaKnown RBP26.04■■□□□ 1.76
BRF1-216ENST00000550208 ASTN1O14525 1302 aa26.04■■□□□ 1.76
BRF1-216ENST00000550208 SNAI1O95863 264 aaPredicted RBP26.03■■□□□ 1.76
BRF1-216ENST00000550208 CFBP00751 764 aa26.03■■□□□ 1.76
BRF1-216ENST00000550208 MSL3Q8N5Y2 521 aaKnown RBP26.03■■□□□ 1.76
BRF1-216ENST00000550208 SYTL5Q8TDW5 730 aaPredicted RBP26.03■■□□□ 1.76
BRF1-216ENST00000550208 MAF1Q9H063 256 aa26.03■■□□□ 1.76
BRF1-216ENST00000550208 PPFIA3O75145 1194 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 CYBAP13498 195 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 PHKBQ93100 1093 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 TBC1D32Q96NH3 1257 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 TAAR1Q96RJ0 339 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 PAK6Q9NQU5 681 aaPredicted RBP26.02■■□□□ 1.76
BRF1-216ENST00000550208 COL20A1Q9P218 1284 aa26.02■■□□□ 1.76
BRF1-216ENST00000550208 PRPF3O43395 683 aaKnown RBP26.01■■□□□ 1.75
BRF1-216ENST00000550208 PFKFB2O60825 505 aa26.01■■□□□ 1.75
BRF1-216ENST00000550208 GJB1P08034 283 aa26.01■■□□□ 1.75
BRF1-216ENST00000550208 ARMCX2Q7L311 632 aa26.01■■□□□ 1.75
BRF1-216ENST00000550208 GPKOWQ92917 476 aaPredicted RBP eCLIP26.01■■□□□ 1.75
BRF1-216ENST00000550208 DEFB118Q96PH6 123 aa26.01■■□□□ 1.75
BRF1-216ENST00000550208 SYNGAP1Q96PV0 1343 aa26.01■■□□□ 1.75
BRF1-216ENST00000550208 SLKQ9H2G2 1235 aaPredicted RBP26.01■■□□□ 1.75
BRF1-216ENST00000550208 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.01■■□□□ 1.75
BRF1-216ENST00000550208 ASB14A6NK59 587 aa26■■□□□ 1.75
BRF1-216ENST00000550208 IFNAR1P17181 557 aa26■■□□□ 1.75
BRF1-216ENST00000550208 EN2P19622 333 aaPredicted RBP26■■□□□ 1.75
BRF1-216ENST00000550208 CNGA1P29973 690 aa26■■□□□ 1.75
BRF1-216ENST00000550208 HOXA13P31271 388 aaPredicted RBP26■■□□□ 1.75
BRF1-216ENST00000550208 ALDH5A1P51649 535 aaPredicted RBP26■■□□□ 1.75
BRF1-216ENST00000550208 HSD17B4P51659 736 aa26■■□□□ 1.75
BRF1-216ENST00000550208 GHRHRQ02643 423 aa26■■□□□ 1.75
BRF1-216ENST00000550208 SCRN1Q12765 414 aa26■■□□□ 1.75
BRF1-216ENST00000550208 HEATR3Q7Z4Q2 680 aa26■■□□□ 1.75
BRF1-216ENST00000550208 ADD3Q9UEY8 706 aaKnown RBP26■■□□□ 1.75
BRF1-216ENST00000550208 LCTP09848 1927 aa26■■□□□ 1.75
BRF1-216ENST00000550208 GCOM1H8Y6P7 765 aaPredicted RBP25.99■■□□□ 1.75
BRF1-216ENST00000550208 LARGE1O95461 756 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 POLR2MP0CAP2 368 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 ZNF865P0CJ78 1059 aaPredicted RBP25.99■■□□□ 1.75
BRF1-216ENST00000550208 ME3Q16798 604 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 WWC2Q6AWC2 1192 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 SAMD3Q8N6K7 520 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 SLC26A6Q9BXS9 759 aa25.99■■□□□ 1.75
BRF1-216ENST00000550208 KIAA0100Q14667 2235 aaKnown RBP25.98■■□□□ 1.75
BRF1-216ENST00000550208 SGPL1O95470 568 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 PKN1Q16512 942 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 NECAB1Q8N987 351 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 DNERQ8NFT8 737 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 MAP3K20Q9NYL2 800 aaKnown RBP25.98■■□□□ 1.75
BRF1-216ENST00000550208 NRBP1Q9UHY1 535 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 CNPY2Q9Y2B0 182 aa25.98■■□□□ 1.75
BRF1-216ENST00000550208 CPLX1O14810 134 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 GJA8P48165 433 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 ACVR2BQ13705 512 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 RABEP1Q15276 862 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 PFKFB3Q16875 520 aaPredicted RBP25.97■■□□□ 1.75
BRF1-216ENST00000550208 TYW1BQ6NUM6 668 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 MORC4Q8TE76 937 aa25.97■■□□□ 1.75
BRF1-216ENST00000550208 U2AF1L4Q8WU68 220 aaKnown RBP25.97■■□□□ 1.75
BRF1-216ENST00000550208 MCM3APO60318 1980 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 DTNBO60941 627 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 SCG2P13521 617 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 AKAP17AQ02040 695 aaKnown RBP25.96■■□□□ 1.75
BRF1-216ENST00000550208 SSRP1Q08945 709 aaKnown RBP25.96■■□□□ 1.75
BRF1-216ENST00000550208 LHX8Q68G74 356 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 USP17L6PQ6QN14 398 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 FCHSD1Q86WN1 690 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 RMDN3Q96TC7 470 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 RNF26Q9BY78 433 aaPredicted RBP25.96■■□□□ 1.75
BRF1-216ENST00000550208 KATNBL1Q9H079 304 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 ABHD16BQ9H3Z7 469 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 PSTPIP2Q9H939 334 aa25.96■■□□□ 1.75
BRF1-216ENST00000550208 ZHX1Q9UKY1 873 aaPredicted RBP25.96■■□□□ 1.75
BRF1-216ENST00000550208 CENPFP49454 3210 aa25.95■■□□□ 1.75
BRF1-216ENST00000550208 STXBP3O00186 592 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 MEIS2O14770 477 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 SEPT4O43236 478 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 TFRCP02786 760 aaKnown RBP25.95■■□□□ 1.74
BRF1-216ENST00000550208 ANO1Q5XXA6 986 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 CPLX2Q6PUV4 134 aaKnown RBP25.95■■□□□ 1.74
BRF1-216ENST00000550208 EEPD1Q7L9B9 569 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 NSUN6Q8TEA1 469 aaKnown RBP25.95■■□□□ 1.74
BRF1-216ENST00000550208 BARHL2Q9NY43 387 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 DDX20Q9UHI6 824 aaKnown RBP25.95■■□□□ 1.74
BRF1-216ENST00000550208 LIMCH1Q9UPQ0 1083 aa25.95■■□□□ 1.74
BRF1-216ENST00000550208 LOC102724159A0A0B4J2E5 919 aa25.94■■□□□ 1.74
BRF1-216ENST00000550208 NAPAP54920 295 aa25.94■■□□□ 1.74
BRF1-216ENST00000550208 PWP2Q15269 919 aaKnown RBP25.94■■□□□ 1.74
BRF1-216ENST00000550208 IFFO2Q5TF58 517 aa25.94■■□□□ 1.74
BRF1-216ENST00000550208 ARHGEF16Q5VV41 709 aa25.94■■□□□ 1.74
BRF1-216ENST00000550208 SHISA4Q96DD7 197 aa25.94■■□□□ 1.74
BRF1-216ENST00000550208 CRISPLD2Q9H0B8 497 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms