RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 B4DLN1 442 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 ZNF865P0CJ78 1059 aaPredicted RBP30.05■■■□□ 2.4
CPSF6-205ENST00000550075 MRPL12P52815 198 aaKnown RBP30.05■■■□□ 2.4
CPSF6-205ENST00000550075 TMTC3Q6ZXV5 915 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 RUFY3Q7L099 469 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 FBXL16Q8N461 479 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 DNERQ8NFT8 737 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 BRF1Q92994 677 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 BRPF3Q9ULD4 1205 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 LRRC37A2A6NM11 1700 aa30.05■■■□□ 2.4
CPSF6-205ENST00000550075 PDE4DIPQ5VU43 2346 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 PPP1R11O60927 126 aaPredicted RBP30.04■■■□□ 2.4
CPSF6-205ENST00000550075 RARBP10826 455 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 ALDH5A1P51649 535 aaPredicted RBP30.04■■■□□ 2.4
CPSF6-205ENST00000550075 ANAPC15P60006 121 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 ACVR2BQ13705 512 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 ZSWIM6Q9HCJ5 1215 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 FAM184BQ9ULE4 1060 aa30.04■■■□□ 2.4
CPSF6-205ENST00000550075 PPP2R5BQ15173 497 aa30.03■■■□□ 2.4
CPSF6-205ENST00000550075 NECAB2Q7Z6G3 386 aa30.03■■■□□ 2.4
CPSF6-205ENST00000550075 UBE2Q1Q7Z7E8 422 aa30.03■■■□□ 2.4
CPSF6-205ENST00000550075 SRBD1Q8N5C6 995 aaKnown RBP30.03■■■□□ 2.4
CPSF6-205ENST00000550075 PIBF1Q8WXW3 757 aa30.03■■■□□ 2.4
CPSF6-205ENST00000550075 HTATIP2Q9BUP3 242 aa30.03■■■□□ 2.4
CPSF6-205ENST00000550075 SAMD3Q8N6K7 520 aa30.02■■■□□ 2.4
CPSF6-205ENST00000550075 ARRDC4Q8NCT1 418 aa30.02■■■□□ 2.4
CPSF6-205ENST00000550075 AGXT2Q9BYV1 514 aa30.02■■■□□ 2.4
CPSF6-205ENST00000550075 MAP3K20Q9NYL2 800 aaKnown RBP30.02■■■□□ 2.4
CPSF6-205ENST00000550075 ASTN1O14525 1302 aa30.01■■■□□ 2.4
CPSF6-205ENST00000550075 CCDC196A0A1B0GTZ2 297 aa30.01■■■□□ 2.39
CPSF6-205ENST00000550075 METAP2P50579 478 aaKnown RBP eCLIP30.01■■■□□ 2.39
CPSF6-205ENST00000550075 APOBRQ0VD83 1088 aa30.01■■■□□ 2.39
CPSF6-205ENST00000550075 CFBP00751 764 aa30■■■□□ 2.39
CPSF6-205ENST00000550075 ANO1Q5XXA6 986 aa30■■■□□ 2.39
CPSF6-205ENST00000550075 SYTL5Q8TDW5 730 aaPredicted RBP30■■■□□ 2.39
CPSF6-205ENST00000550075 MORC4Q8TE76 937 aa30■■■□□ 2.39
CPSF6-205ENST00000550075 PAWRQ96IZ0 340 aaKnown RBP30■■■□□ 2.39
CPSF6-205ENST00000550075 PURBQ96QR8 312 aaKnown RBP30■■■□□ 2.39
CPSF6-205ENST00000550075 VTA1Q9NP79 307 aa30■■■□□ 2.39
CPSF6-205ENST00000550075 GHRHRQ02643 423 aa29.99■■■□□ 2.39
CPSF6-205ENST00000550075 PDE4DQ08499 809 aa29.99■■■□□ 2.39
CPSF6-205ENST00000550075 CMTR1Q8N1G2 835 aaKnown RBP29.99■■■□□ 2.39
CPSF6-205ENST00000550075 XPNPEP3Q9NQH7 507 aa29.99■■■□□ 2.39
CPSF6-205ENST00000550075 NID2Q14112 1375 aa29.99■■■□□ 2.39
CPSF6-205ENST00000550075 KBTBD13C9JR72 458 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 DNM1LO00429 736 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 HSD17B4P51659 736 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 CCDC144BQ3MJ40 725 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 CCDC82Q8N4S0 544 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 DIS3LQ8TF46 1054 aaKnown RBP29.98■■■□□ 2.39
CPSF6-205ENST00000550075 UPF3BQ9BZI7 483 aaKnown RBP29.98■■■□□ 2.39
CPSF6-205ENST00000550075 KATNBL1Q9H079 304 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 C11orf49Q9H6J7 331 aa29.98■■■□□ 2.39
CPSF6-205ENST00000550075 CNTNAP5Q8WYK1 1306 aa29.97■■■□□ 2.39
CPSF6-205ENST00000550075 NSUN6Q8TEA1 469 aaKnown RBP29.97■■■□□ 2.39
CPSF6-205ENST00000550075 TNRC18O15417 2968 aaPredicted RBP29.96■■■□□ 2.39
CPSF6-205ENST00000550075 GCOM1H8Y6P7 765 aaPredicted RBP29.96■■■□□ 2.39
CPSF6-205ENST00000550075 OPLAHO14841 1288 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 POLR2MP0CAP2 368 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 RNF180Q86T96 592 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 FBXO16Q8IX29 292 aaPredicted RBP29.96■■■□□ 2.39
CPSF6-205ENST00000550075 TBC1D5Q92609 795 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 RMDN3Q96TC7 470 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 SPC25Q9HBM1 224 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 PDRG1Q9NUG6 133 aa29.96■■■□□ 2.39
CPSF6-205ENST00000550075 DUSP11O75319 330 aaKnown RBP29.95■■■□□ 2.39
CPSF6-205ENST00000550075 MYCNP04198 464 aaPredicted RBP29.95■■■□□ 2.39
CPSF6-205ENST00000550075 EDNRBP24530 442 aa29.95■■■□□ 2.39
CPSF6-205ENST00000550075 MNX1P50219 401 aaPredicted RBP29.94■■■□□ 2.38
CPSF6-205ENST00000550075 ARHGEF16Q5VV41 709 aa29.94■■■□□ 2.38
CPSF6-205ENST00000550075 EEPD1Q7L9B9 569 aa29.94■■■□□ 2.38
CPSF6-205ENST00000550075 CUL5Q93034 780 aa29.94■■■□□ 2.38
CPSF6-205ENST00000550075 IWS1Q96ST2 819 aa29.94■■■□□ 2.38
CPSF6-205ENST00000550075 COL20A1Q9P218 1284 aa29.94■■■□□ 2.38
CPSF6-205ENST00000550075 EVCP57679 992 aa29.93■■■□□ 2.38
CPSF6-205ENST00000550075 TNFAIP2Q03169 654 aa29.93■■■□□ 2.38
CPSF6-205ENST00000550075 LRRC41Q15345 812 aa29.93■■■□□ 2.38
CPSF6-205ENST00000550075 C8orf34Q49A92 452 aa29.93■■■□□ 2.38
CPSF6-205ENST00000550075 GJC2Q5T442 439 aaPredicted RBP29.93■■■□□ 2.38
CPSF6-205ENST00000550075 NOL8Q76FK4 1167 aaKnown RBP29.93■■■□□ 2.38
CPSF6-205ENST00000550075 LENG1Q96BZ8 264 aaPredicted RBP29.93■■■□□ 2.38
CPSF6-205ENST00000550075 TAAR1Q96RJ0 339 aa29.93■■■□□ 2.38
CPSF6-205ENST00000550075 hCG_1984214I3L0E3 225 aa29.92■■■□□ 2.38
CPSF6-205ENST00000550075 CDC27P30260 824 aa29.92■■■□□ 2.38
CPSF6-205ENST00000550075 HOXA13P31271 388 aaPredicted RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 TOB2Q14106 344 aaPredicted RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 IQSEC1Q6DN90 963 aa29.92■■■□□ 2.38
CPSF6-205ENST00000550075 HEATR3Q7Z4Q2 680 aa29.92■■■□□ 2.38
CPSF6-205ENST00000550075 ZNF713Q8N859 430 aaPredicted RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 RBM27Q9P2N5 1060 aaKnown RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 DDX49Q9Y6V7 483 aaKnown RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 MKI67P46013 3256 aaKnown RBP29.92■■■□□ 2.38
CPSF6-205ENST00000550075 SYNRGQ9UMZ2 1314 aa29.92■■■□□ 2.38
CPSF6-205ENST00000550075 hCG_1642624A0A1W2PR95 340 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 PGK1P00558 417 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 COL6A1P12109 1028 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 ADCYAP1R1P41586 468 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 FUT2Q10981 343 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 IL17RAQ96F46 866 aa29.91■■■□□ 2.38
CPSF6-205ENST00000550075 PXMP2Q9NR77 195 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms