RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 USP17L6PQ6QN14 398 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 USP28Q96RU2 1077 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 PTPN18Q99952 460 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 BTBD7Q9P203 1132 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 MORC2Q9Y6X9 1032 aaPredicted RBP19.85■□□□□ 0.77
LETMD1-220ENST00000549686 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
LETMD1-220ENST00000549686 CFBP00751 764 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 DEFB115Q30KQ5 88 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 EARS2Q5JPH6 523 aaKnown RBP19.84■□□□□ 0.77
LETMD1-220ENST00000549686 PAXIP1Q6ZW49 1069 aaPredicted RBP19.84■□□□□ 0.77
LETMD1-220ENST00000549686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.84■□□□□ 0.77
LETMD1-220ENST00000549686 NEK8Q86SG6 692 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 SHCBP1Q8NEM2 672 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 KCNG4Q8TDN1 519 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 SPATA32Q96LK8 384 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 ANO3Q9BYT9 981 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 RBPJLQ9UBG7 517 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 RCOR1Q9UKL0 485 aa19.84■□□□□ 0.77
LETMD1-220ENST00000549686 NFIBO00712 420 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 FIBPO43427 364 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 CNMDO75829 334 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 CYP2C8P10632 490 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TM4SF4P48230 202 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TOB1P50616 345 aaPredicted RBP19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TTC38Q5R3I4 469 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 RNF207Q6ZRF8 634 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 IFNL1Q8IU54 200 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 JMYQ8N9B5 988 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 GPRC5AQ8NFJ5 357 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TBCKQ8TEA7 893 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 PAGR1Q9BTK6 254 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 MROH8Q9H579 483 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 HOMER2Q9NSB8 354 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TMEM260Q9NX78 707 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.77
LETMD1-220ENST00000549686 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 RIPK3Q9Y572 518 aa19.83■□□□□ 0.77
LETMD1-220ENST00000549686 ALDH1A1P00352 501 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 GCFC2P16383 781 aaKnown RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 TAL1P17542 331 aaPredicted RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 USP11P51784 963 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 ERVK-9P63128 1117 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 ERVK-24P63145 666 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 STK38Q15208 465 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 SF3A1Q15459 793 aaKnown RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 INF2Q27J81 1249 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 MUM1L1Q5H9M0 696 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 POTEEQ6S8J3 1075 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 LINC00301Q8NCQ3 95 aa19.82■□□□□ 0.76
LETMD1-220ENST00000549686 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 MOV10L1Q9BXT6 1211 aaKnown RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.82■□□□□ 0.76
LETMD1-220ENST00000549686 PFASO15067 1338 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 FAM205CA6NFA0 338 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 IGF2BP3O00425 579 aaKnown RBP eCLIP19.81■□□□□ 0.76
LETMD1-220ENST00000549686 HOXA13P31271 388 aaPredicted RBP19.81■□□□□ 0.76
LETMD1-220ENST00000549686 SREBF1P36956 1147 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 SLC39A14Q15043 492 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 NFKBIBQ15653 356 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 MOXD1Q6UVY6 613 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 CLIC4Q9Y696 253 aa19.81■□□□□ 0.76
LETMD1-220ENST00000549686 LAD1O00515 517 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 PPP6R2O75170 966 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 RPS6P62753 249 aaKnown RBP19.8■□□□□ 0.76
LETMD1-220ENST00000549686 TAF1CQ15572 869 aaPredicted RBP19.8■□□□□ 0.76
LETMD1-220ENST00000549686 FAM110CQ1W6H9 321 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 NOM1Q5C9Z4 860 aaKnown RBP19.8■□□□□ 0.76
LETMD1-220ENST00000549686 PPP4R3AQ6IN85 833 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 CYP4F22Q6NT55 531 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 NSMFQ6X4W1 530 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 NCAPG2Q86XI2 1143 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 SYTL5Q8TDW5 730 aaPredicted RBP19.8■□□□□ 0.76
LETMD1-220ENST00000549686 CHAMP1Q96JM3 812 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 CAPNS2Q96L46 248 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 ZFYVE28Q9HCC9 887 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 TXNRD2Q9NNW7 524 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 PCDHB6Q9Y5E3 794 aa19.8■□□□□ 0.76
LETMD1-220ENST00000549686 SPTLC2O15270 562 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 CYP3A4P08684 503 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 ATP2B1P20020 1258 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 ARHGAP4P98171 946 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 CEBPZQ03701 1054 aaKnown RBP19.79■□□□□ 0.76
LETMD1-220ENST00000549686 PTPAQ15257 358 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 LETM2Q2VYF4 491 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 FCHSD1Q86WN1 690 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 TBC1D5Q92609 795 aa19.79■□□□□ 0.76
LETMD1-220ENST00000549686 PRPF40AO75400 957 aaKnown RBP19.78■□□□□ 0.76
LETMD1-220ENST00000549686 ERCC3P19447 782 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 BAATQ14032 418 aaPredicted RBP19.78■□□□□ 0.76
LETMD1-220ENST00000549686 XRRA1Q6P2D8 792 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 ANKRD35Q8N283 1001 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 CRYGNQ8WXF5 182 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 PGBD1Q96JS3 809 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 FTOQ9C0B1 505 aaKnown RBP eCLIP19.78■□□□□ 0.76
LETMD1-220ENST00000549686 GDPD2Q9HCC8 539 aa19.78■□□□□ 0.76
LETMD1-220ENST00000549686 A1CFQ9NQ94 594 aaKnown RBP19.78■□□□□ 0.76
LETMD1-220ENST00000549686 CYP39A1Q9NYL5 469 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms