RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 ALPK3Q96L96 1907 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 PATL2C9JE40 543 aaKnown RBP7.93□□□□□ -1.14
TMEM116-208ENST00000549537 WDR46O15213 610 aaKnown RBP7.93□□□□□ -1.14
TMEM116-208ENST00000549537 MAN1A2O60476 641 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 IGHDP01880 384 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 CCNA1P78396 465 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 NR5A1Q13285 461 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 GRB14Q14449 540 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 CCL14Q16627 93 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
TMEM116-208ENST00000549537 IFNL3Q8IZI9 196 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 SPICE1Q8N0Z3 855 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 EXOC6Q8TAG9 804 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 EVI5LQ96CN4 794 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 DEFB118Q96PH6 123 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 SH2D4AQ9H788 454 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 KANSL2Q9H9L4 492 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 ARHGEF10LQ9HCE6 1279 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 HOXC10Q9NYD6 342 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 ADAMTS5Q9UNA0 930 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 RPTORQ8N122 1335 aa7.93□□□□□ -1.14
TMEM116-208ENST00000549537 FRMPD3Q5JV73 1810 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 MYH4Q9Y623 1939 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 LOC100996750A0A140TA64 210 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 SLC15A5A6NIM6 579 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 MINDY4BA8MYZ0 360 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 FARP2O94887 1054 aaPredicted RBP7.92□□□□□ -1.14
TMEM116-208ENST00000549537 HOXC6P09630 235 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 CAPN2P17655 700 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 CTHP32929 405 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 RGS2P41220 211 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 CACNB2Q08289 660 aaPredicted RBP7.92□□□□□ -1.14
TMEM116-208ENST00000549537 KCNMA1Q12791 1236 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 CCDC129Q6ZRS4 1044 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 TRMT44Q8IYL2 757 aaKnown RBP7.92□□□□□ -1.14
TMEM116-208ENST00000549537 STK11IPQ8N1F8 1099 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 MB21D1Q8N884 522 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 SHCBP1Q8NEM2 672 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 REPS2Q8NFH8 660 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 APBA2Q99767 749 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 KLF16Q9BXK1 252 aaPredicted RBP7.92□□□□□ -1.14
TMEM116-208ENST00000549537 MOV10L1Q9BXT6 1211 aaKnown RBP7.92□□□□□ -1.14
TMEM116-208ENST00000549537 KRTAP4-6Q9BYQ5 205 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 LNPKQ9C0E8 428 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 SPATC1LQ9H0A9 340 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 FBXO28Q9NVF7 368 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 FLRT1Q9NZU1 646 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 NYAP2Q9P242 653 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 TACC3Q9Y6A5 838 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 EYSQ5T1H1 3165 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 MUC3AQ02505 3323 aa7.92□□□□□ -1.14
TMEM116-208ENST00000549537 A0A0D9SFI3 127 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 PRDM1O75626 825 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 FLOT1O75955 427 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 APPP05067 770 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 ZKSCAN1P17029 563 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-208ENST00000549537 TDO2P48775 406 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 NUCB1Q02818 461 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 TMEM132BQ14DG7 1078 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 PLEKHM2Q8IWE5 1019 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 NPLOC4Q8TAT6 608 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 DIS3LQ8TF46 1054 aaKnown RBP7.91□□□□□ -1.14
TMEM116-208ENST00000549537 MKL1Q969V6 931 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 FAM227BQ96M60 508 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 NACAP1Q9BZK3 213 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-208ENST00000549537 OSBPL3Q9H4L5 887 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 MKNK2Q9HBH9 465 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 HMX1Q9NP08 348 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-208ENST00000549537 HELLSQ9NRZ9 838 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 MTMR4Q9NYA4 1195 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 ANAPC4Q9UJX5 808 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 OGDHLQ9ULD0 1010 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 PPP1R9AQ9ULJ8 1098 aa7.91□□□□□ -1.14
TMEM116-208ENST00000549537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
TMEM116-208ENST00000549537 TTC28Q96AY4 2481 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 H0YGN5 161 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 VWA5AO00534 786 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 STRNO43815 780 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 COBLO75128 1261 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 ZIC2O95409 532 aaPredicted RBP7.9□□□□□ -1.14
TMEM116-208ENST00000549537 NDUFB10O96000 172 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 TFRCP02786 760 aaKnown RBP7.9□□□□□ -1.14
TMEM116-208ENST00000549537 FGRP09769 529 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 ERCC3P19447 782 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 CCND3P30281 292 aaPredicted RBP7.9□□□□□ -1.14
TMEM116-208ENST00000549537 NOVP48745 357 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 ATP2B2Q01814 1243 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 PPARAQ07869 468 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 ARID5BQ14865 1188 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 ALX1Q15699 326 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 FAM83BQ5T0W9 1011 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.14
TMEM116-208ENST00000549537 CCAR1Q8IX12 1150 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms