RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 USP24Q9UPU5 2620 aa10.07□□□□□ -0.8
SMARCD1-207ENST00000549526 RAD21O60216 631 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 TBX10O75333 385 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 MYL3P08590 195 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 PLCD1P51178 756 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 CBX2Q14781 532 aaPredicted RBP10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 TMEM192Q8IY95 271 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 HINFPQ9BQA5 517 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 TEX13BQ9BXU2 312 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 SH2D4AQ9H788 454 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 VCPKMTQ9H867 229 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 PA2G4Q9UQ80 394 aaKnown RBP10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 TMX2Q9Y320 296 aa10.06□□□□□ -0.8
SMARCD1-207ENST00000549526 LINC01565O15544 149 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 EFCAB14O75071 495 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 ICAM3P32942 547 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 NDUFV1P49821 464 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 PTPN21Q16825 1174 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 FGD4Q96M96 766 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 PDGFCQ9NRA1 345 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 PPP1R9AQ9ULJ8 1098 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 Q9Y3F1 56 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
SMARCD1-207ENST00000549526 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 EYA4O95677 639 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 LMNAP02545 664 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CHMP4BP1P59074 171 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 HNRNPUQ00839 825 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 TFCP2Q12800 502 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 ADAM15Q13444 863 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 GPNMBQ14956 572 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 TCTN1Q2MV58 587 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 TMEM63BQ5T3F8 832 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 SIAH1Q8IUQ4 282 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 REPS2Q8NFH8 660 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 INCENPQ9NQS7 918 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CTDP1Q9Y5B0 961 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CEP250Q9BV73 2442 aa10.04□□□□□ -0.8
SMARCD1-207ENST00000549526 CSPG5O95196 566 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 PARNO95453 639 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 AMHP03971 560 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 SELPP16109 830 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 CYP7A1P22680 504 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 ARID4AP29374 1257 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 HTRA4P83105 476 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 ICA1Q05084 483 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 NFRKBQ6P4R8 1299 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 LRRC8DQ7L1W4 858 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 CLEC10AQ8IUN9 316 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 TRMT2AQ8IZ69 625 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 MSLNLQ96KJ4 702 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 YME1L1Q96TA2 773 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 FASNP49327 2511 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 SPTBN2O15020 2390 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
SMARCD1-207ENST00000549526 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.8
SMARCD1-207ENST00000549526 MYH8P13535 1937 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 ASB14A6NK59 587 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 NBNO60934 754 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 UQCRFS1P1P0C7P4 283 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 CPT1AP50416 773 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 PTGISQ16647 500 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 FAM83BQ5T0W9 1011 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 KIAA0319Q5VV43 1072 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 MFSD1Q9H3U5 465 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 PTPRCP08575 1304 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 RALGAPA2Q2PPJ7 1873 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms