RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PTPREP23469 700 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 SMARCA1P28370 1054 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 SP4Q02446 784 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 SBK1Q52WX2 424 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 KCNJ14Q9UNX9 436 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 IKBKBO14920 756 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNF75DP51815 510 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 PPP1R7Q15435 360 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 FAM102BQ5T8I3 360 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 C19orf81C9J6K1 198 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 K7ENM7 598 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 TLR3O15455 904 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 CYP2E1P05181 493 aaPredicted RBP10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 STX17P56962 302 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 SARNPP82979 210 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 TNFAIP2Q03169 654 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 LCORLQ8N3X6 602 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 PI4K2BQ8TCG2 481 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 HESX1Q9UBX0 185 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 SRP68Q9UHB9 627 aaKnown RBP10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 DNAI1Q9UI46 699 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
PPFIA2-216ENST00000549396 KLHL30Q0D2K2 578 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 TRMT1LQ7Z2T5 733 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 LPAR1Q92633 364 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 RIOK1Q9BRS2 568 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 DBNDD1Q9H9R9 158 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 PKD2L1Q9P0L9 805 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNRF3Q9ULT6 936 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 NFE2L3Q9Y4A8 694 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 KIAA0391O15091 583 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 PFDN6O15212 129 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 RPN1P04843 607 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 CYP21A2P08686 494 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 INF2Q27J81 1249 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 MFAP3P55082 362 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 KRT76Q01546 638 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 ANKRD36BP1Q96IX9 119 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 FRMPD2Q68DX3 1309 aaPredicted RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 GOLGA8CPA6NN73 597 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 CALRP27797 417 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 GRM4Q14833 912 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 TBC1D9BQ66K14 1250 aa10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 PDS5AQ29RF7 1337 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-216ENST00000549396 CSF1RP07333 972 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 HOXC6P09630 235 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 KRT9P35527 623 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PLCB3Q01970 1234 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 NSUN7Q8NE18 718 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MCPH1Q8NEM0 835 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MYL10Q9BUA6 226 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 DONSONQ9NYP3 566 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 SERTAD1Q9UHV2 236 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MED7O43513 233 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 TNNI1P19237 187 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 EVCP57679 992 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MORC3Q14149 939 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 NEDD9Q14511 834 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 KMT5BQ4FZB7 885 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 XRRA1Q6P2D8 792 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 SKAP1Q86WV1 359 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 RNF34Q969K3 372 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 RPS6KC1Q96S38 1066 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PLCB1Q9NQ66 1216 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 ASB14A6NK59 587 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 ZBTB5O15062 677 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 TMEM191BP0C7N4 346 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 LMNB1P20700 586 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PSMC2P35998 433 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 SCRN1Q12765 414 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 ERCC6LQ2NKX8 1250 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 ARMCX5Q6P1M9 558 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 DCUN1D2Q6PH85 259 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 IFT20Q8IY31 132 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 TRIM58Q8NG06 486 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PIH1D3Q9NQM4 214 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PPP2R3BQ9Y5P8 575 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 RPLP2P05387 115 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 CPA1P15085 419 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 CLCN1P35523 988 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 PDE6CP51160 858 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 TMTC3Q6ZXV5 915 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 OR8K1Q8NGG5 319 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 RAB17Q9H0T7 212 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms