RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SH3RF1Q7Z6J0 888 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 TLK2Q86UE8 772 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 FBXO16Q8IX29 292 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 TRIM43Q96BQ3 446 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 LRCH3Q96II8 777 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 MROH7Q68CQ1 1323 aa21.76■■□□□ 1.07
CHMP1A-207ENST00000549328 ERICH2A1L162 156 aa21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 B4DLN1 442 aa21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 IFIT3O14879 490 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 KIAA0355O15063 1070 aa21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 PQBP1O60828 265 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 CDK7P50613 346 aa21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 MRPL12P52815 198 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 LTBP2Q14767 1821 aa21.75■■□□□ 1.07
CHMP1A-207ENST00000549328 RBM47A0AV96 593 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 KLRF2D3W0D1 207 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 DYNC1LI2O43237 492 aaPredicted RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 DHX16O60231 1041 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 CABYRO75952 493 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 EDNRBP24530 442 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 FAAP100Q0VG06 881 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 SART3Q15020 963 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 FSCN1Q16658 493 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 QRICH1Q2TAL8 776 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 DUSP28Q4G0W2 176 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 MCF2L2Q86YR7 1114 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 STAG2Q8N3U4 1231 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 BADQ92934 168 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 VTI1AQ96AJ9 217 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 VAT1LQ9HCJ6 419 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 RBM8AQ9Y5S9 174 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 LRRC37A2A6NM11 1700 aa21.74■■□□□ 1.07
CHMP1A-207ENST00000549328 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 PALM3A6NDB9 673 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 ARVCFO00192 962 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 ZEB2O60315 1214 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 BEX3Q00994 111 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 PDE4DQ08499 809 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 SEZ6LQ9BYH1 1024 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 WDR11Q9BZH6 1224 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 TMEM39AQ9NV64 488 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 MAD2L2Q9UI95 211 aa21.73■■□□□ 1.07
CHMP1A-207ENST00000549328 RAG1P15918 1043 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 WTAPQ15007 396 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 STOX1Q6ZVD7 989 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 MTMR8Q96EF0 704 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 AMNQ9BXJ7 453 aa21.72■■□□□ 1.07
CHMP1A-207ENST00000549328 CXCL17Q6UXB2 119 aa21.71■■□□□ 1.07
CHMP1A-207ENST00000549328 ESYT1Q9BSJ8 1104 aa21.71■■□□□ 1.07
CHMP1A-207ENST00000549328 MTA3Q9BTC8 594 aa21.71■■□□□ 1.07
CHMP1A-207ENST00000549328 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
CHMP1A-207ENST00000549328 ZBTB5O15062 677 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 NKRFO15226 690 aaKnown RBP eCLIP21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 ITGB8P26012 769 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 TROAPQ12815 778 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 TRAF1Q13077 416 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 GRM4Q14833 912 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 TMEM63BQ5T3F8 832 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 SLC43A3Q8NBI5 491 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 SYTL5Q8TDW5 730 aaPredicted RBP21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 NSUN6Q8TEA1 469 aaKnown RBP21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 TBC1D5Q92609 795 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 TBX21Q9UL17 535 aa21.7■■□□□ 1.06
CHMP1A-207ENST00000549328 MYH6P13533 1939 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 ANTXR2P58335 489 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 TMEM67Q5HYA8 995 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 IWS1Q96ST2 819 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 SENP2Q9HC62 589 aa21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 MAP3K20Q9NYL2 800 aaKnown RBP21.69■■□□□ 1.06
CHMP1A-207ENST00000549328 TLR3O15455 904 aaKnown RBP21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 TIMP1P01033 207 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 PTGS1P23219 599 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 GHRHRQ02643 423 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 PPP2R5BQ15173 497 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 SHHQ15465 462 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 CHST3Q7LGC8 479 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 CATIPQ7Z7H3 387 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 FAM126BQ8IXS8 530 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 TAAR1Q96RJ0 339 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 MAP3K14Q99558 947 aa21.68■■□□□ 1.06
CHMP1A-207ENST00000549328 CPT1AP50416 773 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 ITGA7Q13683 1181 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 NECTIN1Q15223 517 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 TMTC2Q8N394 836 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 RMDN3Q96TC7 470 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 POLR3EQ9NVU0 708 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 COL20A1Q9P218 1284 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
CHMP1A-207ENST00000549328 PPP1R11O60927 126 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms