RNA–Protein interactions for RNA: ENST00000549295.1

KRT4-202, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-202ENST00000549295 SCTRP47872 440 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 DNM2P50570 870 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 FXR1P51114 621 aaKnown RBP eCLIP6.07□□□□□ -1.44
KRT4-202ENST00000549295 ZNF131P52739 623 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 COPB1P53618 953 aaKnown RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 ROR2Q01974 943 aaKnown RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 GOLGA8FQ08AF8 430 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 GOLGA8DPQ0D2H9 430 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 IFT88Q13099 833 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 ITGB3BPQ13352 177 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 MTMR3Q13615 1198 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 CUL1Q13616 776 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 PDIA5Q14554 519 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 NAA25Q14CX7 972 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 TTF1Q15361 905 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 GPR162Q16538 588 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 CDC37Q16543 378 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 IFI16Q16666 785 aaKnown RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 RABL6Q3YEC7 729 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 TTMPQ5BVD1 217 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 KRT40Q6A162 431 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 CCDC129Q6ZRS4 1044 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 APBB1IPQ7Z5R6 666 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 CEP57Q86XR8 500 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 CREG2Q8IUH2 290 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 MB21D2Q8IYB1 491 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 SPATA4Q8NEY3 305 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 RASSF8Q8NHQ8 419 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 SMCR8Q8TEV9 937 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 RNF166Q96A37 237 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 BICD1Q96G01 975 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 ALS2CR12Q96Q35 445 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 EYA1Q99502 592 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 NUP88Q99567 741 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 ALG1Q9BT22 464 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 EDEM3Q9BZQ6 932 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 PLEKHA4Q9H4M7 779 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 TMBIM4Q9HC24 238 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 SENP2Q9HC62 589 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 NLRP2Q9NX02 1062 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 NOP53Q9NZM5 478 aaKnown RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 FBXO2Q9UK22 296 aaPredicted RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 RPL26L1Q9UNX3 145 aaKnown RBP6.07□□□□□ -1.44
KRT4-202ENST00000549295 HPS5Q9UPZ3 1129 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 C15orf41Q9Y2V0 281 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 HYOU1Q9Y4L1 999 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 SAMM50Q9Y512 469 aa6.07□□□□□ -1.44
KRT4-202ENST00000549295 SPEF2Q9C093 1822 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 KLF18A0A0U1RQI7 1052 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 CCT8L1PA6NM43 557 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 GOLGA8BA8MQT2 603 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 PPP1R3GB7ZBB8 358 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 KIF28PB7ZC32 967 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 H7C1W4 665 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 STXBP3O00186 592 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 PJA2O43164 708 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 TEX33O43247 280 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 PRC1O43663 620 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 SMNDC1O75940 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
KRT4-202ENST00000549295 RTN3O95197 1032 aaPredicted RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 ATP1A1P05023 1023 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 VIMP08670 466 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 YBX3P16989 372 aaKnown RBP eCLIP6.06□□□□□ -1.44
KRT4-202ENST00000549295 MARCKSP29966 332 aaPredicted RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 CNGA1P29973 690 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 CDC27P30260 824 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 RPS6KA3P51812 740 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 CCNHP51946 323 aaPredicted RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 EIF3BP55884 814 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 INHBEP58166 350 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 ELF3P78545 371 aaPredicted RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 ZBED6P86452 979 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 GUCY1B3Q02153 619 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 NEXNQ0ZGT2 675 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 PDCLQ13371 301 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 BLMHQ13867 455 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 LBRQ14739 615 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 SPA17Q15506 151 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 SGSM1Q2NKQ1 1148 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 CFAP221Q4G0U5 840 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 TCP11X2Q5H9J9 407 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 MIS18BP1Q6P0N0 1132 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 SLC30A9Q6PML9 568 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 RINLQ6ZS11 566 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 SESTD1Q86VW0 696 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 SGMS1Q86VZ5 419 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 FAM228AQ86W67 206 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 NOSTRINQ8IVI9 506 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 ACRBPQ8NEB7 543 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 NLGN2Q8NFZ4 835 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 MICAL1Q8TDZ2 1067 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 SH3TC2Q8TF17 1288 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 LMBR1Q8WVP7 490 aa6.06□□□□□ -1.44
KRT4-202ENST00000549295 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
KRT4-202ENST00000549295 CCT6BQ92526 530 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms