RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 EHD4Q9H223 541 aa12.9□□□□□ -0.34
TROAP-209ENST00000549275 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
TROAP-209ENST00000549275 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
TROAP-209ENST00000549275 R4GN57 208 aa12.9□□□□□ -0.34
TROAP-209ENST00000549275 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.89□□□□□ -0.35
TROAP-209ENST00000549275 SELPP16109 830 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
TROAP-209ENST00000549275 PPP4CP60510 307 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 PPM1JQ5JR12 505 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
TROAP-209ENST00000549275 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 LRRC8DQ7L1W4 858 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
TROAP-209ENST00000549275 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
TROAP-209ENST00000549275 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 BRD1O95696 1058 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
TROAP-209ENST00000549275 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
TROAP-209ENST00000549275 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
TROAP-209ENST00000549275 F6X3S4 739 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 VWA5AO00534 786 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
TROAP-209ENST00000549275 ZIC2O95409 532 aaPredicted RBP12.87□□□□□ -0.35
TROAP-209ENST00000549275 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 PURAQ00577 322 aaKnown RBP12.87□□□□□ -0.35
TROAP-209ENST00000549275 RBL2Q08999 1139 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 ANKRD44Q8N8A2 993 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 FLCNQ8NFG4 579 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
TROAP-209ENST00000549275 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
TROAP-209ENST00000549275 SPEGQ15772 3267 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 GRM6O15303 877 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 NBNO60934 754 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 MMP1P03956 469 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
TROAP-209ENST00000549275 FGD4Q96M96 766 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
TROAP-209ENST00000549275 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
TROAP-209ENST00000549275 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 NR2E1Q9Y466 385 aa12.86□□□□□ -0.35
TROAP-209ENST00000549275 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
TROAP-209ENST00000549275 PMLP29590 882 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 SEPT2Q15019 361 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
TROAP-209ENST00000549275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
TROAP-209ENST00000549275 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
TROAP-209ENST00000549275 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 MYO7AQ13402 2215 aa12.85□□□□□ -0.35
TROAP-209ENST00000549275 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 PI15O43692 258 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 CIAO1O76071 339 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 CTNNB1P35222 781 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 BMPR1AP36894 532 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 CPT1AP50416 773 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
TROAP-209ENST00000549275 TCTN1Q2MV58 587 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
TROAP-209ENST00000549275 ASB14A6NK59 587 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 KPNA6O60684 536 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
TROAP-209ENST00000549275 PTGISQ16647 500 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 KDF1Q8NAX2 398 aaPredicted RBP12.83□□□□□ -0.36
TROAP-209ENST00000549275 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
TROAP-209ENST00000549275 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 VCPKMTQ9H867 229 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 BARX2Q9UMQ3 279 aaPredicted RBP12.83□□□□□ -0.36
TROAP-209ENST00000549275 TMX2Q9Y320 296 aa12.83□□□□□ -0.36
TROAP-209ENST00000549275 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
TROAP-209ENST00000549275 TAF4O00268 1085 aa12.82□□□□□ -0.36
TROAP-209ENST00000549275 SLC30A4O14863 429 aa12.82□□□□□ -0.36
TROAP-209ENST00000549275 LGR5O75473 907 aa12.82□□□□□ -0.36
TROAP-209ENST00000549275 NPR3P17342 541 aa12.82□□□□□ -0.36
TROAP-209ENST00000549275 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
TROAP-209ENST00000549275 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
TROAP-209ENST00000549275 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms