RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PRPF3O43395 683 aaKnown RBP11.09□□□□□ -0.63
RAB5B-205ENST00000549034 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 CFBP00751 764 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 HMGCRP04035 888 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 CYP2C19P33261 490 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 RPS6P62753 249 aaKnown RBP11.09□□□□□ -0.63
RAB5B-205ENST00000549034 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
RAB5B-205ENST00000549034 FUT2Q10981 343 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 MTFR1Q15390 333 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 OLFML2BQ68BL8 750 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 CPLX2Q6PUV4 134 aaKnown RBP11.09□□□□□ -0.63
RAB5B-205ENST00000549034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
RAB5B-205ENST00000549034 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 RNF208Q9H0X6 261 aa11.09□□□□□ -0.63
RAB5B-205ENST00000549034 PFKFB2O60825 505 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 CCL5P13501 91 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 CNGA1P29973 690 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
RAB5B-205ENST00000549034 SCRN1Q12765 414 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 RABEP1Q15276 862 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 NTRK3Q16288 839 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 ME3Q16798 604 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 NECAB1Q8N987 351 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 FAM133AQ8N9E0 248 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 PHKBQ93100 1093 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 TAAR1Q96RJ0 339 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 HMX1Q9NP08 348 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-205ENST00000549034 ADD3Q9UEY8 706 aaKnown RBP11.08□□□□□ -0.64
RAB5B-205ENST00000549034 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
RAB5B-205ENST00000549034 ASB14A6NK59 587 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 POLR2MP0CAP2 368 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 IFNAR1P17181 557 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 CCND3P30281 292 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 SAMD3Q8N6K7 520 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 CUL5Q93034 780 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 MAF1Q9H063 256 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 PSTPIP2Q9H939 334 aa11.07□□□□□ -0.64
RAB5B-205ENST00000549034 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
RAB5B-205ENST00000549034 SMCO2A6NFE2 343 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 B4DLN1 442 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 OPLAHO14841 1288 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 ST18O60284 1047 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 DTNBO60941 627 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 PFKFB3Q16875 520 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 ARHGEF16Q5VV41 709 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 WWC2Q6AWC2 1192 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 MAMDC4Q6UXC1 1216 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 ZSCAN31Q96LW9 406 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 MPHOSPH6Q99547 160 aaKnown RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 RNF26Q9BY78 433 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-205ENST00000549034 CNPY2Q9Y2B0 182 aa11.06□□□□□ -0.64
RAB5B-205ENST00000549034 NID2Q14112 1375 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 MCM3APO60318 1980 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 CDKL5O76039 1030 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 LARGE1O95461 756 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 IGHA2P01877 340 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 SCG2P13521 617 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 HSD17B4P51659 736 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 NAPAP54920 295 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 PKN1Q16512 942 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 MAP3K21Q5TCX8 1036 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 USP17L6PQ6QN14 398 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 ARMCX2Q7L311 632 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
RAB5B-205ENST00000549034 FGD4Q96M96 766 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 DEFB118Q96PH6 123 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 RMDN3Q96TC7 470 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.05□□□□□ -0.64
RAB5B-205ENST00000549034 BARHL2Q9NY43 387 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 COL20A1Q9P218 1284 aa11.05□□□□□ -0.64
RAB5B-205ENST00000549034 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
RAB5B-205ENST00000549034 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
RAB5B-205ENST00000549034 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms