RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TTMPQ5BVD1 217 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 MIIPQ5JXC2 388 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
HDAC7-228ENST00000548938 TSGA10Q9BZW7 698 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 SAMM50Q9Y512 469 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 SHTN1A0MZ66 631 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 TYW1BQ6NUM6 668 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 DTHD1Q6ZMT9 781 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 BLIDQ8IZY5 108 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 NOC3LQ8WTT2 800 aaKnown RBP15.28■□□□□ 0.04
HDAC7-228ENST00000548938 IFIH1Q9BYX4 1025 aaKnown RBP15.28■□□□□ 0.04
HDAC7-228ENST00000548938 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 TACC1O75410 805 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 HAUS3Q68CZ6 603 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 ZNF572Q7Z3I7 529 aaPredicted RBP15.28■□□□□ 0.04
HDAC7-228ENST00000548938 P2RX5Q93086 422 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 OSBPL9Q96SU4 736 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 NOC4LQ9BVI4 516 aaKnown RBP15.28■□□□□ 0.04
HDAC7-228ENST00000548938 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 AFF2P51816 1311 aa15.28■□□□□ 0.04
HDAC7-228ENST00000548938 COL1A1P02452 1464 aaPredicted RBP15.28■□□□□ 0.04
HDAC7-228ENST00000548938 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 USP17L21D6R901 530 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 UBA7P41226 1012 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 PDCLQ13371 301 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 FBXW10Q5XX13 1052 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 ARHGAP20Q9P2F6 1191 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 DLEC1Q9Y238 1755 aa15.27■□□□□ 0.04
HDAC7-228ENST00000548938 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 EPHB6O15197 1021 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 NCK2O43639 380 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 FGRP09769 529 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 CCNE1P24864 410 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 EPHB4P54760 987 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 CHRNDQ07001 517 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.03
HDAC7-228ENST00000548938 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 POLD4Q9HCU8 107 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.03
HDAC7-228ENST00000548938 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.03
HDAC7-228ENST00000548938 WTIPA6NIX2 430 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-228ENST00000548938 OPA1O60313 960 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 USO1O60763 962 aaKnown RBP15.26■□□□□ 0.03
HDAC7-228ENST00000548938 GYG1P46976 350 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 CDK17Q00537 523 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 ITIH3Q06033 890 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 STK4Q13043 487 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 MCTP2Q6DN12 878 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 C2CD5Q86YS7 1000 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 STIM2Q9P246 746 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
HDAC7-228ENST00000548938 CALML3P27482 149 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
HDAC7-228ENST00000548938 KIF11P52732 1056 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 ZNF384Q8TF68 577 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 ERGIC2Q96RQ1 377 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 RUFY1Q96T51 708 aa15.26■□□□□ 0.03
HDAC7-228ENST00000548938 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 FCER1AP12319 257 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 PDE4DQ08499 809 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 EMBQ6PCB8 327 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 KCNV1Q6PIU1 500 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 RUBCNQ92622 972 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 CACNA1SQ13698 1873 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
HDAC7-228ENST00000548938 CCDC194A0A1B0GVG4 234 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 HSF2BPO75031 334 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 MYL1P05976 194 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 EPB41P11171 864 aaKnown RBP15.25■□□□□ 0.03
HDAC7-228ENST00000548938 PLCG1P19174 1290 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 INPP5BP32019 993 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
HDAC7-228ENST00000548938 INF2Q27J81 1249 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 FIGNQ5HY92 759 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 KCTD16Q68DU8 428 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 ZSCAN29Q8IWY8 852 aaPredicted RBP15.25■□□□□ 0.03
HDAC7-228ENST00000548938 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 ZIM3Q96PE6 472 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 FAM207AQ9NSI2 230 aaPredicted RBP15.25■□□□□ 0.03
HDAC7-228ENST00000548938 PCDHA4Q9UN74 947 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
HDAC7-228ENST00000548938 NTSR2O95665 410 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 TCP1P17987 556 aaKnown RBP15.24■□□□□ 0.03
HDAC7-228ENST00000548938 ATP1A2P50993 1020 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 SKOR1P84550 965 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 C8orf74Q6P047 294 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 ANKRD13CQ8N6S4 541 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 CCSER1Q9C0I3 900 aa15.24■□□□□ 0.03
HDAC7-228ENST00000548938 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms