RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 TCHHQ07283 1943 aa23.16■■□□□ 1.3
CTDSP2-204ENST00000548823 COL11A1P12107 1806 aaPredicted RBP23.16■■□□□ 1.3
CTDSP2-204ENST00000548823 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 DUSP11O75319 330 aaKnown RBP23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 SKIV2LQ15477 1246 aaKnown RBP23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 FAM126BQ8IXS8 530 aa23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 VTI1AQ96AJ9 217 aa23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 RIOK1Q9BRS2 568 aaKnown RBP23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 ADAMTS5Q9UNA0 930 aa23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 SLC4A4Q9Y6R1 1079 aa23.15■■□□□ 1.3
CTDSP2-204ENST00000548823 MYADML2A6NDP7 307 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 POLR3DP05423 398 aaPredicted RBP23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 ASGR1P07306 291 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 PPP2R2DQ66LE6 453 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 MTA3Q9BTC8 594 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 CNNM2Q9H8M5 875 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 ATP6V1DQ9Y5K8 247 aa23.14■■□□□ 1.3
CTDSP2-204ENST00000548823 PRC1O43663 620 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 CYP2C18P33260 490 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 SAMD1Q6SPF0 538 aaPredicted RBP23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 TMEM179Q6ZVK1 233 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 SPICE1Q8N0Z3 855 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 SMARCC2Q8TAQ2 1214 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 TMX2Q9Y320 296 aa23.14■■□□□ 1.29
CTDSP2-204ENST00000548823 MUC6Q6W4X9 2439 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 WDR46O15213 610 aaKnown RBP23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 C6orf222P0C671 652 aaPredicted RBP23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 POU3F3P20264 500 aaPredicted RBP23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 COPB2P35606 906 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 STAT3P40763 770 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 MCTP1Q6DN14 999 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 ALYREFQ86V81 257 aaKnown RBP23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 TMEM87BQ96K49 555 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 SH2D4AQ9H788 454 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 VCPKMTQ9H867 229 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 SPC25Q9HBM1 224 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 ARHGEF10LQ9HCE6 1279 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 COG5Q9UP83 839 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 PCDHA11Q9Y5I1 949 aa23.13■■□□□ 1.29
CTDSP2-204ENST00000548823 PRRC2BQ5JSZ5 2229 aaKnown RBP23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 TLL1O43897 1013 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 SNAI1O95863 264 aaPredicted RBP23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 CD4P01730 458 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 RABGGTBP53611 331 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 ANTXR2P58335 489 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 OTOP2Q7RTS6 562 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 LRRC2Q9BYS8 371 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 KRT23Q9C075 422 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 C11orf16Q9NQ32 467 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 LMBRD1Q9NUN5 540 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 MTMR6Q9Y217 621 aa23.12■■□□□ 1.29
CTDSP2-204ENST00000548823 BAZ2AQ9UIF9 1905 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 TRANK1O15050 2925 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 F13A1P00488 732 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 PDIA3P30101 505 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 TDO2P48775 406 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 APOBRQ0VD83 1088 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 SCRN1Q12765 414 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 MAMDC4Q6UXC1 1216 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 SIAH1Q8IUQ4 282 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 UPF3AQ9H1J1 476 aaKnown RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 RNF41Q9H4P4 317 aaPredicted RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 ZHX1Q9UKY1 873 aaPredicted RBP23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 MTCH2Q9Y6C9 303 aa23.11■■□□□ 1.29
CTDSP2-204ENST00000548823 PRKAB2O43741 272 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 GTPBP6O43824 516 aaPredicted RBP23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 PCP11498 1178 aaKnown RBP23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 GJA9P57773 515 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 IRX5P78411 483 aaPredicted RBP23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 STK3Q13188 491 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 KLHL40Q2TBA0 621 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 LARP1BQ659C4 914 aaKnown RBP23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 KIF3AQ9Y496 699 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 SLC4A7Q9Y6M7 1214 aa23.1■■□□□ 1.29
CTDSP2-204ENST00000548823 NAV1Q8NEY1 1877 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 LRRC37A2A6NM11 1700 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 VWA5AO00534 786 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 MYOGP15173 224 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 DEKP35659 375 aaKnown RBP23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 GNASQ5JWF2 1037 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 HIPK3Q9H422 1215 aa23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 ZNF214Q9UL59 606 aaPredicted RBP23.09■■□□□ 1.29
CTDSP2-204ENST00000548823 ICA1Q05084 483 aa23.08■■□□□ 1.29
CTDSP2-204ENST00000548823 RGS22Q8NE09 1264 aa23.08■■□□□ 1.29
CTDSP2-204ENST00000548823 MCM9Q9NXL9 1143 aa23.08■■□□□ 1.29
CTDSP2-204ENST00000548823 DHX16O60231 1041 aaKnown RBP23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 EVX2Q03828 476 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 ACVR2BQ13705 512 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 MFSD6Q6ZSS7 791 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 TMEM87AQ8NBN3 555 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 NSUN7Q8NE18 718 aaKnown RBP23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 KHSRPQ92945 711 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 CRNKL1Q9BZJ0 848 aaKnown RBP23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 ATP8A2Q9NTI2 1148 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 FBXO28Q9NVF7 368 aa23.07■■□□□ 1.28
CTDSP2-204ENST00000548823 SWAP70Q9UH65 585 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms