RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SLC12A7Q9Y666 1083 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 REC8O95072 547 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 CFBP00751 764 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 SYN1P17600 705 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 RNF180Q86T96 592 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
DDX54-205ENST00000548786 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 MRPL11Q9Y3B7 192 aaKnown RBP18.32■□□□□ 0.52
DDX54-205ENST00000548786 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
DDX54-205ENST00000548786 C6orf222P0C671 652 aaPredicted RBP18.31■□□□□ 0.52
DDX54-205ENST00000548786 KIF5BP33176 963 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 HSPA4P34932 840 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 TNFAIP2Q03169 654 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 KRT32Q14532 448 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
DDX54-205ENST00000548786 CCDC82Q8N4S0 544 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
DDX54-205ENST00000548786 SNX14Q9Y5W7 946 aa18.31■□□□□ 0.52
DDX54-205ENST00000548786 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 HOXA13P31271 388 aaPredicted RBP18.3■□□□□ 0.52
DDX54-205ENST00000548786 LIFRP42702 1097 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 FGD1P98174 961 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
DDX54-205ENST00000548786 PDE4DQ08499 809 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 MCF2L2Q86YR7 1114 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 SYTL5Q8TDW5 730 aaPredicted RBP18.3■□□□□ 0.52
DDX54-205ENST00000548786 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 ATP11BQ9Y2G3 1177 aa18.3■□□□□ 0.52
DDX54-205ENST00000548786 PNMA6FA0A0J9YX94 578 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 OPLAHO14841 1288 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 DUSP11O75319 330 aaKnown RBP18.29■□□□□ 0.52
DDX54-205ENST00000548786 SMPD1P17405 629 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 BEX3Q00994 111 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 TAPT1Q6NXT6 567 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
DDX54-205ENST00000548786 BRPF3Q9ULD4 1205 aa18.29■□□□□ 0.52
DDX54-205ENST00000548786 A0A1W2PQ45 241 aaPredicted RBP18.28■□□□□ 0.52
DDX54-205ENST00000548786 A0A1W2PQY0 241 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 CALM1P0DP23 149 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 CALM2P0DP24 149 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 CALM3P0DP25 149 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 EIF2AK2P19525 551 aaKnown RBP18.28■□□□□ 0.52
DDX54-205ENST00000548786 RTP1P59025 263 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 KCNA10Q16322 511 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 APOA5Q6Q788 366 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 RGS22Q8NE09 1264 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 MORC4Q8TE76 937 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
DDX54-205ENST00000548786 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 VTA1Q9NP79 307 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 PHF24Q9UPV7 400 aa18.28■□□□□ 0.52
DDX54-205ENST00000548786 COLQQ9Y215 455 aaPredicted RBP18.28■□□□□ 0.52
DDX54-205ENST00000548786 KLF18A0A0U1RQI7 1052 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 TRIM60Q495X7 471 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 GNASQ5JWF2 1037 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 ARHGEF16Q5VV41 709 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 SLC39A5Q6ZMH5 540 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 TLK2Q86UE8 772 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 FANCBQ8NB91 859 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 DNERQ8NFT8 737 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 KCNB2Q92953 911 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 RMDN3Q96TC7 470 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 MPHOSPH6Q99547 160 aaKnown RBP18.27■□□□□ 0.52
DDX54-205ENST00000548786 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 SPZ1Q9BXG8 430 aa18.27■□□□□ 0.52
DDX54-205ENST00000548786 SEC63Q9UGP8 760 aaKnown RBP18.27■□□□□ 0.52
DDX54-205ENST00000548786 DYNC1LI2O43237 492 aaPredicted RBP18.26■□□□□ 0.51
DDX54-205ENST00000548786 HMGB1P09429 215 aaKnown RBP18.26■□□□□ 0.51
DDX54-205ENST00000548786 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
DDX54-205ENST00000548786 GNAQP50148 359 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 ACLYP53396 1101 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 APOBRQ0VD83 1088 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 Q6ZUG5 572 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 FCHSD1Q86WN1 690 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 KLHDC9Q8NEP7 349 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
DDX54-205ENST00000548786 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 WDR11Q9BZH6 1224 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
DDX54-205ENST00000548786 GOLGA8AA7E2F4 631 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 GOLGA8BA8MQT2 603 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 ZBTB43O43298 467 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 ASGR1P07306 291 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 EDNRBP24530 442 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 HSD17B4P51659 736 aa18.25■□□□□ 0.51
DDX54-205ENST00000548786 GJA9P57773 515 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms