RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 CHMP4CQ96CF2 233 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 PURBQ96QR8 312 aaKnown RBP20.07■□□□□ 0.8
VDR-205ENST00000548664 TET1Q8NFU7 2136 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 GTPBP6O43824 516 aaPredicted RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 ZFYP08048 801 aaPredicted RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 PURAQ00577 322 aaKnown RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 TFAP4Q01664 338 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 PDE4BQ07343 736 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 CERS4Q9HA82 394 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 PRR12Q9ULL5 1215 aa20.06■□□□□ 0.8
VDR-205ENST00000548664 TRIP12Q14669 1992 aaPredicted RBP20.06■□□□□ 0.8
VDR-205ENST00000548664 KRT40Q6A162 431 aa20.05■□□□□ 0.8
VDR-205ENST00000548664 NSMFQ6X4W1 530 aa20.05■□□□□ 0.8
VDR-205ENST00000548664 RASGRP2Q7LDG7 609 aa20.05■□□□□ 0.8
VDR-205ENST00000548664 SLC9A7Q96T83 725 aa20.05■□□□□ 0.8
VDR-205ENST00000548664 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
VDR-205ENST00000548664 ARHGEF15O94989 841 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
VDR-205ENST00000548664 RCSD1Q6JBY9 416 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 LRFN3Q9BTN0 628 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 EPHX3Q9H6B9 360 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 CCPG1Q9ULG6 757 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 COG5Q9UP83 839 aa20.04■□□□□ 0.8
VDR-205ENST00000548664 ACTN1P12814 892 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 RFC2P35250 354 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 CPT1AP50416 773 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 TAP1Q03518 808 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 PPARAQ07869 468 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 PHOSPHO2Q8TCD6 241 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 NACAP1Q9BZK3 213 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 CHMP4BQ9H444 224 aaKnown RBP20.03■□□□□ 0.8
VDR-205ENST00000548664 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
VDR-205ENST00000548664 ARIH1Q9Y4X5 557 aaPredicted RBP20.03■□□□□ 0.8
VDR-205ENST00000548664 PITPNM1O00562 1244 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 TLL1O43897 1013 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 ICAM1P05362 532 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 SLC3A2P08195 630 aaKnown RBP20.02■□□□□ 0.8
VDR-205ENST00000548664 MYL3P08590 195 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 ALDH5A1P51649 535 aaPredicted RBP20.02■□□□□ 0.8
VDR-205ENST00000548664 ARNTL2Q8WYA1 636 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 SEC62Q99442 399 aaKnown RBP20.02■□□□□ 0.8
VDR-205ENST00000548664 MTG1Q9BT17 334 aaPredicted RBP20.02■□□□□ 0.8
VDR-205ENST00000548664 NAPBQ9H115 298 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 IL17RBQ9NRM6 502 aa20.02■□□□□ 0.8
VDR-205ENST00000548664 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
VDR-205ENST00000548664 RBM47A0AV96 593 aaKnown RBP20.01■□□□□ 0.79
VDR-205ENST00000548664 NMT2O60551 498 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 IQCF3P0C7M6 154 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 BAATQ14032 418 aaPredicted RBP20.01■□□□□ 0.79
VDR-205ENST00000548664 PPP4R3BQ5MIZ7 849 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 HERC6Q8IVU3 1022 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 GPATCH3Q96I76 525 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
VDR-205ENST00000548664 HCN4Q9Y3Q4 1203 aa20.01■□□□□ 0.79
VDR-205ENST00000548664 SIP14410 1827 aa20■□□□□ 0.79
VDR-205ENST00000548664 LOC102724159A0A0B4J2E5 919 aa20■□□□□ 0.79
VDR-205ENST00000548664 NFIBO00712 420 aa20■□□□□ 0.79
VDR-205ENST00000548664 PWP2Q15269 919 aaKnown RBP20■□□□□ 0.79
VDR-205ENST00000548664 NBPF20Q3BBV1 942 aa20■□□□□ 0.79
VDR-205ENST00000548664 FAM47CQ5HY64 1035 aa20■□□□□ 0.79
VDR-205ENST00000548664 NFRKBQ6P4R8 1299 aa20■□□□□ 0.79
VDR-205ENST00000548664 OR6J1Q8NGC5 347 aa20■□□□□ 0.79
VDR-205ENST00000548664 PPP1R13LQ8WUF5 828 aa20■□□□□ 0.79
VDR-205ENST00000548664 HLA-CQ95604 372 aa20■□□□□ 0.79
VDR-205ENST00000548664 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
VDR-205ENST00000548664 GPHNQ9NQX3 736 aaPredicted RBP20■□□□□ 0.79
VDR-205ENST00000548664 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
VDR-205ENST00000548664 LPXNO60711 386 aa19.99■□□□□ 0.79
VDR-205ENST00000548664 GRB10Q13322 594 aa19.99■□□□□ 0.79
VDR-205ENST00000548664 SPRED2Q7Z698 418 aa19.99■□□□□ 0.79
VDR-205ENST00000548664 KIF28PB7ZC32 967 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 NOVP48745 357 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 LRRFIP1Q32MZ4 808 aaKnown RBP19.98■□□□□ 0.79
VDR-205ENST00000548664 TMEM31Q5JXX7 168 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 SLC30A10Q6XR72 485 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 RETREG2Q8NC44 543 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 KHSRPQ92945 711 aaKnown RBP eCLIP19.98■□□□□ 0.79
VDR-205ENST00000548664 FTOQ9C0B1 505 aaKnown RBP eCLIP19.98■□□□□ 0.79
VDR-205ENST00000548664 C11orf16Q9NQ32 467 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 INCENPQ9NQS7 918 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 MTMR7Q9Y216 660 aa19.98■□□□□ 0.79
VDR-205ENST00000548664 PTPDC1A2A3K4 754 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 FOXP2O15409 715 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 BAIAP3O94812 1187 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 SLC16A2P36021 539 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 PTPN11Q06124 597 aaPredicted RBP19.97■□□□□ 0.79
VDR-205ENST00000548664 CCDC96Q2M329 555 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 TTBK2Q6IQ55 1244 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 DCAF4Q8WV16 495 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 KIAA1217Q5T5P2 1943 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 RAD50Q92878 1312 aa19.97■□□□□ 0.79
VDR-205ENST00000548664 A6NJR5 290 aa19.96■□□□□ 0.79
VDR-205ENST00000548664 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
VDR-205ENST00000548664 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms