RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 DDIT3P35638 169 aa5.81□□□□□ -1.48
APP-217ENST00000548570 SLC19A1P41440 591 aa5.81□□□□□ -1.48
APP-217ENST00000548570 STAT2P52630 851 aa5.81□□□□□ -1.48
APP-217ENST00000548570 INHBEP58166 350 aa5.81□□□□□ -1.48
APP-217ENST00000548570 FGD1P98174 961 aa5.81□□□□□ -1.48
APP-217ENST00000548570 CDC37Q16543 378 aaPredicted RBP5.81□□□□□ -1.48
APP-217ENST00000548570 QRICH1Q2TAL8 776 aa5.81□□□□□ -1.48
APP-217ENST00000548570 WWC2Q6AWC2 1192 aa5.81□□□□□ -1.48
APP-217ENST00000548570 FAM160B2Q86V87 743 aa5.81□□□□□ -1.48
APP-217ENST00000548570 JMYQ8N9B5 988 aa5.81□□□□□ -1.48
APP-217ENST00000548570 PRPF38AQ8NAV1 312 aaKnown RBP5.81□□□□□ -1.48
APP-217ENST00000548570 CLEC4DQ8WXI8 215 aa5.81□□□□□ -1.48
APP-217ENST00000548570 KIFC2Q96AC6 838 aa5.81□□□□□ -1.48
APP-217ENST00000548570 ZSCAN31Q96LW9 406 aaPredicted RBP5.81□□□□□ -1.48
APP-217ENST00000548570 PURBQ96QR8 312 aaKnown RBP5.81□□□□□ -1.48
APP-217ENST00000548570 CFHR5Q9BXR6 569 aa5.81□□□□□ -1.48
APP-217ENST00000548570 TANGO6Q9C0B7 1094 aa5.81□□□□□ -1.48
APP-217ENST00000548570 ARHGAP39Q9C0H5 1083 aa5.81□□□□□ -1.48
APP-217ENST00000548570 PORCNQ9H237 461 aa5.81□□□□□ -1.48
APP-217ENST00000548570 SLKQ9H2G2 1235 aaPredicted RBP5.81□□□□□ -1.48
APP-217ENST00000548570 RAVER2Q9HCJ3 691 aaKnown RBP5.81□□□□□ -1.48
APP-217ENST00000548570 ZCCHC17Q9NP64 241 aaKnown RBP5.81□□□□□ -1.48
APP-217ENST00000548570 MORF4L1Q9UBU8 362 aa5.81□□□□□ -1.48
APP-217ENST00000548570 CPA4Q9UI42 421 aa5.81□□□□□ -1.48
APP-217ENST00000548570 FEM1BQ9UK73 627 aa5.81□□□□□ -1.48
APP-217ENST00000548570 ASTN1O14525 1302 aa5.8□□□□□ -1.48
APP-217ENST00000548570 PCNTO95613 3336 aa5.8□□□□□ -1.48
APP-217ENST00000548570 GRXCR2A6NFK2 248 aa5.8□□□□□ -1.48
APP-217ENST00000548570 STXBP3O00186 592 aa5.8□□□□□ -1.48
APP-217ENST00000548570 CA12O43570 354 aa5.8□□□□□ -1.48
APP-217ENST00000548570 TLR2O60603 784 aa5.8□□□□□ -1.48
APP-217ENST00000548570 TBC1D8O95759 1140 aa5.8□□□□□ -1.48
APP-217ENST00000548570 ICAM1P05362 532 aa5.8□□□□□ -1.48
APP-217ENST00000548570 OSBPP22059 807 aa5.8□□□□□ -1.48
APP-217ENST00000548570 KIF5BP33176 963 aa5.8□□□□□ -1.48
APP-217ENST00000548570 MCM2P49736 904 aa5.8□□□□□ -1.48
APP-217ENST00000548570 GNAQP50148 359 aa5.8□□□□□ -1.48
APP-217ENST00000548570 SREBF2Q12772 1141 aa5.8□□□□□ -1.48
APP-217ENST00000548570 PPP2R5BQ15173 497 aa5.8□□□□□ -1.48
APP-217ENST00000548570 PFKFB3Q16875 520 aaPredicted RBP5.8□□□□□ -1.48
APP-217ENST00000548570 NOM1Q5C9Z4 860 aaKnown RBP5.8□□□□□ -1.48
APP-217ENST00000548570 MUM1L1Q5H9M0 696 aa5.8□□□□□ -1.48
APP-217ENST00000548570 OTUD7BQ6GQQ9 843 aa5.8□□□□□ -1.48
APP-217ENST00000548570 CCDC174Q6PII3 467 aa5.8□□□□□ -1.48
APP-217ENST00000548570 SYNE3Q6ZMZ3 975 aa5.8□□□□□ -1.48
APP-217ENST00000548570 ANKRD13CQ8N6S4 541 aa5.8□□□□□ -1.48
APP-217ENST00000548570 IL27Q8NEV9 243 aa5.8□□□□□ -1.48
APP-217ENST00000548570 CTCFLQ8NI51 663 aaPredicted RBP5.8□□□□□ -1.48
APP-217ENST00000548570 CHURC1Q8WUH1 139 aa5.8□□□□□ -1.48
APP-217ENST00000548570 PIBF1Q8WXW3 757 aa5.8□□□□□ -1.48
APP-217ENST00000548570 GPKOWQ92917 476 aaPredicted RBP eCLIP5.8□□□□□ -1.48
APP-217ENST00000548570 COA7Q96BR5 231 aa5.8□□□□□ -1.48
APP-217ENST00000548570 DDX11Q96FC9 970 aa5.8□□□□□ -1.48
APP-217ENST00000548570 FGD4Q96M96 766 aa5.8□□□□□ -1.48
APP-217ENST00000548570 LZTS2Q9BRK4 669 aa5.8□□□□□ -1.48
APP-217ENST00000548570 LLPHQ9BRT6 129 aaKnown RBP5.8□□□□□ -1.48
APP-217ENST00000548570 SLC26A6Q9BXS9 759 aa5.8□□□□□ -1.48
APP-217ENST00000548570 MOV10L1Q9BXT6 1211 aaKnown RBP5.8□□□□□ -1.48
APP-217ENST00000548570 RNF26Q9BY78 433 aaPredicted RBP5.8□□□□□ -1.48
APP-217ENST00000548570 SH2B1Q9NRF2 756 aaPredicted RBP5.8□□□□□ -1.48
APP-217ENST00000548570 RBM28Q9NW13 759 aaKnown RBP5.8□□□□□ -1.48
APP-217ENST00000548570 COL20A1Q9P218 1284 aa5.8□□□□□ -1.48
APP-217ENST00000548570 NAP1L2Q9ULW6 460 aaPredicted RBP5.8□□□□□ -1.48
APP-217ENST00000548570 RABGAP1Q9Y3P9 1069 aa5.8□□□□□ -1.48
APP-217ENST00000548570 POLR2AP24928 1970 aaKnown RBP5.8□□□□□ -1.48
APP-217ENST00000548570 STK36Q9NRP7 1315 aa5.79□□□□□ -1.48
APP-217ENST00000548570 PNMA6FA0A0J9YX94 578 aa5.79□□□□□ -1.48
APP-217ENST00000548570 M0R2N6 131 aa5.79□□□□□ -1.48
APP-217ENST00000548570 NFIBO00712 420 aa5.79□□□□□ -1.48
APP-217ENST00000548570 MEIS2O14770 477 aa5.79□□□□□ -1.48
APP-217ENST00000548570 TRPA1O75762 1119 aa5.79□□□□□ -1.48
APP-217ENST00000548570 IGHA2P01877 340 aa5.79□□□□□ -1.48
APP-217ENST00000548570 ERCC3P19447 782 aa5.79□□□□□ -1.48
APP-217ENST00000548570 STAT3P40763 770 aa5.79□□□□□ -1.48
APP-217ENST00000548570 ERVK-9P63128 1117 aa5.79□□□□□ -1.48
APP-217ENST00000548570 ERVK-24P63145 666 aa5.79□□□□□ -1.48
APP-217ENST00000548570 IRX3P78415 501 aaPredicted RBP5.79□□□□□ -1.48
APP-217ENST00000548570 GHRHRQ02643 423 aa5.79□□□□□ -1.48
APP-217ENST00000548570 PKP1Q13835 747 aa5.79□□□□□ -1.48
APP-217ENST00000548570 TAF1CQ15572 869 aaPredicted RBP5.79□□□□□ -1.48
APP-217ENST00000548570 FAM110CQ1W6H9 321 aa5.79□□□□□ -1.48
APP-217ENST00000548570 EARS2Q5JPH6 523 aaKnown RBP5.79□□□□□ -1.48
APP-217ENST00000548570 SNRNP48Q6IEG0 339 aaKnown RBP5.79□□□□□ -1.48
APP-217ENST00000548570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.79□□□□□ -1.48
APP-217ENST00000548570 HOMER1Q86YM7 354 aa5.79□□□□□ -1.48
APP-217ENST00000548570 RIOX2Q8IUF8 465 aa5.79□□□□□ -1.48
APP-217ENST00000548570 CPXCR1Q8N123 301 aa5.79□□□□□ -1.48
APP-217ENST00000548570 TNFRSF25Q93038 417 aa5.79□□□□□ -1.48
APP-217ENST00000548570 INTS4Q96HW7 963 aaKnown RBP5.79□□□□□ -1.48
APP-217ENST00000548570 PARK7Q99497 189 aaKnown RBP5.79□□□□□ -1.48
APP-217ENST00000548570 PAGR1Q9BTK6 254 aa5.79□□□□□ -1.48
APP-217ENST00000548570 SPATC1LQ9H0A9 340 aa5.79□□□□□ -1.48
APP-217ENST00000548570 EFCC1Q9HA90 598 aa5.79□□□□□ -1.48
APP-217ENST00000548570 HOXC10Q9NYD6 342 aa5.79□□□□□ -1.48
APP-217ENST00000548570 VPS54Q9P1Q0 977 aa5.79□□□□□ -1.48
APP-217ENST00000548570 ZDHHC9Q9Y397 364 aa5.79□□□□□ -1.48
APP-217ENST00000548570 PCDHB3Q9Y5E6 796 aa5.79□□□□□ -1.48
APP-217ENST00000548570 DDX49Q9Y6V7 483 aaKnown RBP5.79□□□□□ -1.48
APP-217ENST00000548570 LOC285556D6RIA3 1793 aa5.79□□□□□ -1.48
APP-217ENST00000548570 CCDC196A0A1B0GTZ2 297 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms