RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 KANSL2Q9H9L4 492 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 PCDH12Q9NPG4 1184 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 USP25Q9UHP3 1055 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 PCDHA7Q9UN72 937 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 TMX2Q9Y320 296 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 PCDHAC2Q9Y5I4 1007 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 ZSWIM8A7E2V4 1837 aa8.21□□□□□ -1.09
TMEM116-206ENST00000548283 MINDY4BA8MYZ0 360 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 CTAGE5O15320 804 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 CUTAO60888 179 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 TYW1BQ6NUM6 668 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 MYOZ2Q9NPC6 264 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 PCDHA6Q9UN73 950 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 PCDHA8Q9Y5H6 950 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 WNT10BO00744 389 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 TSPY3P0CV98 308 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 TSPY8P0CW00 308 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 FAM47AQ5JRC9 791 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 FOXR2Q6PJQ5 311 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 SYNE3Q6ZMZ3 975 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 CCAR1Q8IX12 1150 aaKnown RBP8.21□□□□□ -1.1
TMEM116-206ENST00000548283 MYCBPQ99417 103 aaPredicted RBP8.21□□□□□ -1.1
TMEM116-206ENST00000548283 USTQ9Y2C2 406 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 CLIC4Q9Y696 253 aa8.21□□□□□ -1.1
TMEM116-206ENST00000548283 TRPM7Q96QT4 1865 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 UBE2Q2LH0YL09 131 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 PPP1R11O60927 126 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 CALML3P27482 149 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 MTMR3Q13615 1198 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 KANK3Q6NY19 840 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 TTC30AQ86WT1 665 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 FAM184AQ8NB25 1140 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SLC44A5Q8NCS7 719 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 PHKBQ93100 1093 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 CCDC34Q96HJ3 373 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 RANBP17Q9H2T7 1088 aaKnown RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 KAT14Q9H8E8 782 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 TSPY2A6NKD2 308 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 ADCY5O95622 1261 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 VAC14Q08AM6 782 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 CBLBQ13191 982 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 EARS2Q5JPH6 523 aaKnown RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 HYIQ5T013 277 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 NIM1KQ8IY84 436 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 LRRN4CLQ8ND94 238 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 TMC2Q8TDI7 906 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 AIFM3Q96NN9 605 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 WDR18Q9BV38 432 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 UBXN6Q9BZV1 441 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SPC25Q9HBM1 224 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 RIC8AQ9NPQ8 531 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 MRGBPQ9NV56 204 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 RPTORQ8N122 1335 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 KRT2P35908 639 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 DHX8Q14562 1220 aaKnown RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 PPP4R3AQ6IN85 833 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SHC4Q6S5L8 630 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 MICU3Q86XE3 530 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 ZNF444Q8N0Y2 327 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SDR16C5Q8N3Y7 309 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 SYAP1Q96A49 352 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 MTMR9Q96QG7 549 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 GLT8D2Q9H1C3 349 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
TMEM116-206ENST00000548283 PCDHGB7Q9Y5F8 929 aa8.2□□□□□ -1.1
TMEM116-206ENST00000548283 PNMA6FA0A0J9YX94 578 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 CFAP69A5D8W1 941 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 ADAMTS3O15072 1205 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 CYP3A4P08684 503 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 SCNN1DP51172 638 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 FERMT2Q96AC1 680 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 MYL10Q9BUA6 226 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 JMJD4Q9H9V9 463 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 ZNF277Q9NRM2 450 aaPredicted RBP8.19□□□□□ -1.1
TMEM116-206ENST00000548283 ATP2A1O14983 1001 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 POLR3DP05423 398 aaPredicted RBP8.19□□□□□ -1.1
TMEM116-206ENST00000548283 IL17AQ16552 155 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 EGFL6Q8IUX8 553 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
TMEM116-206ENST00000548283 BRD3Q15059 726 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 SYCP1Q15431 976 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 CTCFLQ8NI51 663 aaPredicted RBP8.18□□□□□ -1.1
TMEM116-206ENST00000548283 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.1
TMEM116-206ENST00000548283 OPLAHO14841 1288 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 MYO1BO43795 1136 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 CIITAP33076 1130 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 CAP2P40123 477 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 ZNF211Q13398 564 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms