RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 WBP1Q96G27 269 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 KCTD15Q96SI1 283 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 C11orf49Q9H6J7 331 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 TMOD3Q9NYL9 352 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CABP1Q9NZU7 370 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 USP35Q9P2H5 1018 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 FLGP20930 4061 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 ADAMTS20P59510 1910 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 ZNF521Q96K83 1311 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 PLXND1Q9Y4D7 1925 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 WTIPA6NIX2 430 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 TLR2O60603 784 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 NTSR2O95665 410 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 FOSL1P15407 271 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 PMLP29590 882 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CABP4P57796 275 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 ST5P78524 1137 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 SP3Q02447 781 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 IKZF1Q13422 519 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 COL9A2Q14055 689 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 AAK1Q2M2I8 961 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CPZQ66K79 652 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CYFIP1Q7L576 1253 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 TMEFF1Q8IYR6 380 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 ZNF34Q8IZ26 560 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CD99L2Q8TCZ2 262 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 U2AF1L4Q8WU68 220 aaKnown RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 HERVK_113Q902F9 699 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 TEX13AQ9BXU3 409 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 SEZ6LQ9BYH1 1024 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 DEF6Q9H4E7 631 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 SLC52A2Q9HAB3 445 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 SMPD4Q9NXE4 827 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 POGKQ9P215 609 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 MAP4K5Q9Y4K4 846 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 LOC730098B7Z3J9 87 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 GTPBP6O43824 516 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 NR3C2P08235 984 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 XRCC5P13010 732 aaKnown RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 SLC5A1P13866 664 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 MSX1P28360 303 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 USP48Q86UV5 1035 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 C1orf127Q8N9H9 656 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 PIK3R5Q8WYR1 880 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 MEGF10Q96KG7 1140 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CDHR5Q9HBB8 845 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 ZNF277Q9NRM2 450 aaPredicted RBP0.53□□□□□ -2.32
CEP290-203ENST00000547691 EVA1BQ9NVM1 165 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 STK26Q9P289 416 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 STAP2Q9UGK3 403 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 KCTD3Q9Y597 815 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 LRBAP50851 2863 aa0.53□□□□□ -2.32
CEP290-203ENST00000547691 CHD9Q3L8U1 2897 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 ADM5C9JUS6 153 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 IRF6O14896 467 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 KRT38O76015 456 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 GHRHP01286 108 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 SRFP11831 508 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 ALADP13716 330 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 SDHBP21912 280 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 CCR10P46092 362 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 PLCD1P51178 756 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 LIMK1P53667 647 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 NANOS3P60323 173 aaKnown RBP0.53□□□□□ -2.33
CEP290-203ENST00000547691 SRSF1Q07955 248 aaKnown RBP eCLIP0.53□□□□□ -2.33
CEP290-203ENST00000547691 PPIL2Q13356 520 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 ST3GAL2Q16842 350 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 PRR23BQ6ZRT6 265 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 FAM43BQ6ZT52 329 aaPredicted RBP0.53□□□□□ -2.33
CEP290-203ENST00000547691 ANKRD33Q7Z3H0 272 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 NME9Q86XW9 330 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 APOBEC3FQ8IUX4 373 aaKnown RBP0.53□□□□□ -2.33
CEP290-203ENST00000547691 SCUBE1Q8IWY4 988 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 FAM178BQ8IXR5 827 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 FMR1NBQ8N0W7 255 aaPredicted RBP0.53□□□□□ -2.33
CEP290-203ENST00000547691 SLC43A3Q8NBI5 491 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.53□□□□□ -2.33
CEP290-203ENST00000547691 MYLIPQ8WY64 445 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 PHOX2BQ99453 314 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 FAM83CQ9BQN1 747 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 TBC1D2Q9BYX2 928 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.53□□□□□ -2.33
CEP290-203ENST00000547691 NDFIP2Q9NV92 336 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 FAM13BQ9NYF5 915 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 PTGFRNQ9P2B2 879 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 MORF4L1Q9UBU8 362 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 NRBP1Q9UHY1 535 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 KLF15Q9UIH9 416 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 GJD2Q9UKL4 321 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 RBM19Q9Y4C8 960 aaKnown RBP0.53□□□□□ -2.33
CEP290-203ENST00000547691 TRIM17Q9Y577 477 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 NID2Q14112 1375 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 ABCC4O15439 1325 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 ZMYM6O95789 1325 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 PLXNA4Q9HCM2 1894 aa0.53□□□□□ -2.33
CEP290-203ENST00000547691 MED19A0JLT2 244 aaPredicted RBP0.52□□□□□ -2.33
CEP290-203ENST00000547691 HMX2A2RU54 273 aa0.52□□□□□ -2.33
CEP290-203ENST00000547691 NPEPPSL1A6NEC2 478 aa0.52□□□□□ -2.33
CEP290-203ENST00000547691 TMEM191CA6NGB0 347 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms