RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 TLR2O60603 784 aa18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 HMGCS2P54868 508 aa18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 ICA1Q05084 483 aa18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 GPKOWQ92917 476 aaPredicted RBP eCLIP18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 MKL1Q969V6 931 aa18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 TTC12Q9H892 705 aaPredicted RBP18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 FAM13BQ9NYF5 915 aa18.83■□□□□ 0.61
CHMP1A-204ENST00000547687 NLRP12P59046 1061 aa18.83■□□□□ 0.6
CHMP1A-204ENST00000547687 ASPRV1Q53RT3 343 aa18.83■□□□□ 0.6
CHMP1A-204ENST00000547687 OTOP1Q7RTM1 612 aa18.83■□□□□ 0.6
CHMP1A-204ENST00000547687 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-204ENST00000547687 SRPRBQ9Y5M8 271 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-204ENST00000547687 FAM205CA6NFA0 338 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 NPY5RQ15761 445 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 EARS2Q5JPH6 523 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 SPECC1Q5M775 1068 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 ZNF280CQ8ND82 737 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 VAT1LQ9HCJ6 419 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 ZBTB21Q9ULJ3 1066 aa18.82■□□□□ 0.6
CHMP1A-204ENST00000547687 BIN1O00499 593 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 SMARCA1P28370 1054 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 NLRP5P59047 1200 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 GRIN1Q05586 938 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 ZNF543Q08ER8 600 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 MTMR2Q13614 643 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 DPCR1Q3MIW9 517 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 LONRF3Q496Y0 759 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 SARM1Q6SZW1 724 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 KRBA2Q6ZNG9 492 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 DRC7Q8IY82 874 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 TNFRSF25Q93038 417 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 DOCK3Q8IZD9 2030 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 MGAMO43451 1857 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 RAD21O60216 631 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 OFD1O75665 1012 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 HOMER1Q86YM7 354 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 AOPEPQ8N6M6 819 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 CNNM3Q8NE01 707 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 ERO1AQ96HE7 468 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 BPIFA3Q9BQP9 254 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 MORC2Q9Y6X9 1032 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 TNRC18O15417 2968 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-204ENST00000547687 ASNSP08243 561 aa18.8■□□□□ 0.6
CHMP1A-204ENST00000547687 WWC2Q6AWC2 1192 aa18.8■□□□□ 0.6
CHMP1A-204ENST00000547687 TYW1BQ6NUM6 668 aa18.8■□□□□ 0.6
CHMP1A-204ENST00000547687 FASTKD5Q7L8L6 764 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-204ENST00000547687 RIOX1Q9H6W3 641 aa18.8■□□□□ 0.6
CHMP1A-204ENST00000547687 ZYXQ15942 572 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 TTBK2Q6IQ55 1244 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 KCTD1Q719H9 257 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 HEATR3Q7Z4Q2 680 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 ELOA2Q8IYF1 753 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 RRP36Q96EU6 259 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 PIGSQ96S52 555 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 ZCCHC17Q9NP64 241 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 SH3GLB2Q9NR46 395 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 BMP15O95972 392 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 CTGFP29279 349 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 PNOCQ13519 176 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 C17orf99Q6UX52 265 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 BARHL2Q9NY43 387 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 ADGRA2Q96PE1 1338 aa18.79■□□□□ 0.6
CHMP1A-204ENST00000547687 A0A1W2PRG0 241 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 ADAMTS3O15072 1205 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 CDC25BP30305 580 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 PKNOX2Q96KN3 472 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 CSRNP2Q9H175 543 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 HOOK1Q9UJC3 728 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 F5H6K3 240 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 STXBP3O00186 592 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 CALML3P27482 149 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 SLC16A2P36021 539 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 SLC1A4P43007 532 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 LACTBP83111 547 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 KLRC3Q07444 240 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 ZNF174Q15697 407 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 SEC63Q9UGP8 760 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 AGTPBP1Q9UPW5 1226 aa18.78■□□□□ 0.6
CHMP1A-204ENST00000547687 KIAA0100Q14667 2235 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 POLR2DO15514 142 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 SOX10P56693 466 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 TTC38Q5R3I4 469 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 ADGRF4Q8IZF3 695 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 MRFAP1L1Q96HT8 127 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 NAP1L5Q96NT1 182 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 KCNF1Q9H3M0 494 aa18.77■□□□□ 0.6
CHMP1A-204ENST00000547687 PTGS1P23219 599 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 BACE1P56817 501 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms