RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 CENPFP49454 3210 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 PFKFB2O60825 505 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 LARGE1O95461 756 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 IFNAR1P17181 557 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 SCRN1Q12765 414 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 HEATR3Q7Z4Q2 680 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 ZNF467Q7Z7K2 595 aaPredicted RBP23.72■■□□□ 1.39
C12orf49-203ENST00000547630 GPKOWQ92917 476 aaPredicted RBP eCLIP23.72■■□□□ 1.39
C12orf49-203ENST00000547630 LCTP09848 1927 aa23.72■■□□□ 1.39
C12orf49-203ENST00000547630 RBBP6Q7Z6E9 1792 aaKnown RBP23.72■■□□□ 1.39
C12orf49-203ENST00000547630 CPLX1O14810 134 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 ME3Q16798 604 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 SLC26A6Q9BXS9 759 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 MAF1Q9H063 256 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 RNF208Q9H0X6 261 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 HMX1Q9NP08 348 aaPredicted RBP23.71■■□□□ 1.39
C12orf49-203ENST00000547630 ASTN1O14525 1302 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 RPTORQ8N122 1335 aa23.71■■□□□ 1.39
C12orf49-203ENST00000547630 PRPF3O43395 683 aaKnown RBP23.7■■□□□ 1.38
C12orf49-203ENST00000547630 PRAMEF19Q5SWL8 479 aa23.7■■□□□ 1.38
C12orf49-203ENST00000547630 WWC2Q6AWC2 1192 aa23.7■■□□□ 1.38
C12orf49-203ENST00000547630 MAMDC4Q6UXC1 1216 aa23.7■■□□□ 1.38
C12orf49-203ENST00000547630 MSL3Q8N5Y2 521 aaKnown RBP23.7■■□□□ 1.38
C12orf49-203ENST00000547630 SYTL5Q8TDW5 730 aaPredicted RBP23.7■■□□□ 1.38
C12orf49-203ENST00000547630 TMEM106CQ9BVX2 250 aa23.7■■□□□ 1.38
C12orf49-203ENST00000547630 CCND3P30281 292 aaPredicted RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 HSD17B4P51659 736 aa23.69■■□□□ 1.38
C12orf49-203ENST00000547630 AKAP17AQ02040 695 aaKnown RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 CPLX2Q6PUV4 134 aaKnown RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 NECAB1Q8N987 351 aa23.69■■□□□ 1.38
C12orf49-203ENST00000547630 TRPV1Q8NER1 839 aa23.69■■□□□ 1.38
C12orf49-203ENST00000547630 RNF26Q9BY78 433 aaPredicted RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 COL20A1Q9P218 1284 aa23.69■■□□□ 1.38
C12orf49-203ENST00000547630 ADD3Q9UEY8 706 aaKnown RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 DDX49Q9Y6V7 483 aaKnown RBP23.69■■□□□ 1.38
C12orf49-203ENST00000547630 SYNGAP1Q96PV0 1343 aa23.69■■□□□ 1.38
C12orf49-203ENST00000547630 ASB14A6NK59 587 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 GCOM1H8Y6P7 765 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 SNAI1O95863 264 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 POLR2MP0CAP2 368 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 HOXA13P31271 388 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 ALDH5A1P51649 535 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 GHRHRQ02643 423 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 SSRP1Q08945 709 aaKnown RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 PKN1Q16512 942 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 PFKFB3Q16875 520 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 ARMCX2Q7L311 632 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 SAMD3Q8N6K7 520 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 TAAR1Q96RJ0 339 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 MAP3K20Q9NYL2 800 aaKnown RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 RBM27Q9P2N5 1060 aaKnown RBP23.68■■□□□ 1.38
C12orf49-203ENST00000547630 LIMCH1Q9UPQ0 1083 aa23.68■■□□□ 1.38
C12orf49-203ENST00000547630 CYBAP13498 195 aa23.67■■□□□ 1.38
C12orf49-203ENST00000547630 SCG2P13521 617 aa23.67■■□□□ 1.38
C12orf49-203ENST00000547630 CNGA1P29973 690 aa23.67■■□□□ 1.38
C12orf49-203ENST00000547630 NAPAP54920 295 aa23.67■■□□□ 1.38
C12orf49-203ENST00000547630 DNERQ8NFT8 737 aa23.67■■□□□ 1.38
C12orf49-203ENST00000547630 hCG_1984214I3L0E3 225 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 STXBP3O00186 592 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 SOX10P56693 466 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 TYW1BQ6NUM6 668 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 TRIM22Q8IYM9 498 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 ZNF713Q8N859 430 aaPredicted RBP23.66■■□□□ 1.38
C12orf49-203ENST00000547630 GTF3C6Q969F1 213 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 PAK6Q9NQU5 681 aaPredicted RBP23.66■■□□□ 1.38
C12orf49-203ENST00000547630 BARHL2Q9NY43 387 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 CNPY2Q9Y2B0 182 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 MCM3APO60318 1980 aa23.66■■□□□ 1.38
C12orf49-203ENST00000547630 POTEFA5A3E0 1075 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 ST18O60284 1047 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 DTNBO60941 627 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 CAPN15O75808 1086 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 FCHSD1Q86WN1 690 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 DEFB118Q96PH6 123 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 RMDN3Q96TC7 470 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 PSTPIP2Q9H939 334 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 CDKL5O76039 1030 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 GJB1P08034 283 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 PPP1R18Q6NYC8 613 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 USP17L6PQ6QN14 398 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 CUL5Q93034 780 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 NRBP1Q9UHY1 535 aa23.65■■□□□ 1.38
C12orf49-203ENST00000547630 ZHX1Q9UKY1 873 aaPredicted RBP23.65■■□□□ 1.38
C12orf49-203ENST00000547630 LOC102724159A0A0B4J2E5 919 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 MEIS2O14770 477 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 CTDNEP1O95476 244 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 ZNF865P0CJ78 1059 aaPredicted RBP23.64■■□□□ 1.37
C12orf49-203ENST00000547630 ACVR2BQ13705 512 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 PWP2Q15269 919 aaKnown RBP23.64■■□□□ 1.37
C12orf49-203ENST00000547630 ARHGEF16Q5VV41 709 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 SMARCC2Q8TAQ2 1214 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 MORC4Q8TE76 937 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 NSUN6Q8TEA1 469 aaKnown RBP23.64■■□□□ 1.37
C12orf49-203ENST00000547630 ZSCAN31Q96LW9 406 aaPredicted RBP23.64■■□□□ 1.37
C12orf49-203ENST00000547630 ABHD16BQ9H3Z7 469 aa23.64■■□□□ 1.37
C12orf49-203ENST00000547630 DEXIO95424 95 aa23.63■■□□□ 1.37
C12orf49-203ENST00000547630 EIF2AK2P19525 551 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms