RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 SH3RF1Q7Z6J0 888 aa21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 TLK2Q86UE8 772 aa21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 FBXO16Q8IX29 292 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 TRIM43Q96BQ3 446 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 LRCH3Q96II8 777 aa21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 MROH7Q68CQ1 1323 aa21.76■■□□□ 1.07
CHMP1A-203ENST00000547614 ERICH2A1L162 156 aa21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 B4DLN1 442 aa21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 IFIT3O14879 490 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 KIAA0355O15063 1070 aa21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 PQBP1O60828 265 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 CDK7P50613 346 aa21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 MRPL12P52815 198 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 LTBP2Q14767 1821 aa21.75■■□□□ 1.07
CHMP1A-203ENST00000547614 RBM47A0AV96 593 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 KLRF2D3W0D1 207 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 DYNC1LI2O43237 492 aaPredicted RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 DHX16O60231 1041 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 CABYRO75952 493 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 EDNRBP24530 442 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 FAAP100Q0VG06 881 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 SART3Q15020 963 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 FSCN1Q16658 493 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 QRICH1Q2TAL8 776 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 DUSP28Q4G0W2 176 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 MCF2L2Q86YR7 1114 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 STAG2Q8N3U4 1231 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 BADQ92934 168 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 VTI1AQ96AJ9 217 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 VAT1LQ9HCJ6 419 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 RBM8AQ9Y5S9 174 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 LRRC37A2A6NM11 1700 aa21.74■■□□□ 1.07
CHMP1A-203ENST00000547614 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 PALM3A6NDB9 673 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 ARVCFO00192 962 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 ZEB2O60315 1214 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 BEX3Q00994 111 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 PDE4DQ08499 809 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 SEZ6LQ9BYH1 1024 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 WDR11Q9BZH6 1224 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 TMEM39AQ9NV64 488 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 MAD2L2Q9UI95 211 aa21.73■■□□□ 1.07
CHMP1A-203ENST00000547614 RAG1P15918 1043 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 WTAPQ15007 396 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 STOX1Q6ZVD7 989 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 MTMR8Q96EF0 704 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 AMNQ9BXJ7 453 aa21.72■■□□□ 1.07
CHMP1A-203ENST00000547614 CXCL17Q6UXB2 119 aa21.71■■□□□ 1.07
CHMP1A-203ENST00000547614 ESYT1Q9BSJ8 1104 aa21.71■■□□□ 1.07
CHMP1A-203ENST00000547614 MTA3Q9BTC8 594 aa21.71■■□□□ 1.07
CHMP1A-203ENST00000547614 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
CHMP1A-203ENST00000547614 ZBTB5O15062 677 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 NKRFO15226 690 aaKnown RBP eCLIP21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 ITGB8P26012 769 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 TROAPQ12815 778 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 TRAF1Q13077 416 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 GRM4Q14833 912 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 TMEM63BQ5T3F8 832 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 SLC43A3Q8NBI5 491 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 SYTL5Q8TDW5 730 aaPredicted RBP21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 NSUN6Q8TEA1 469 aaKnown RBP21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 TBC1D5Q92609 795 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 TBX21Q9UL17 535 aa21.7■■□□□ 1.06
CHMP1A-203ENST00000547614 MYH6P13533 1939 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 ANTXR2P58335 489 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 TMEM67Q5HYA8 995 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 IWS1Q96ST2 819 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 SENP2Q9HC62 589 aa21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 MAP3K20Q9NYL2 800 aaKnown RBP21.69■■□□□ 1.06
CHMP1A-203ENST00000547614 TLR3O15455 904 aaKnown RBP21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 TIMP1P01033 207 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 PTGS1P23219 599 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 GHRHRQ02643 423 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 PPP2R5BQ15173 497 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 SHHQ15465 462 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 CHST3Q7LGC8 479 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 CATIPQ7Z7H3 387 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 FAM126BQ8IXS8 530 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 TAAR1Q96RJ0 339 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 MAP3K14Q99558 947 aa21.68■■□□□ 1.06
CHMP1A-203ENST00000547614 CPT1AP50416 773 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 ITGA7Q13683 1181 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 NECTIN1Q15223 517 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 TMTC2Q8N394 836 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 RMDN3Q96TC7 470 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 POLR3EQ9NVU0 708 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 COL20A1Q9P218 1284 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
CHMP1A-203ENST00000547614 PPP1R11O60927 126 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms