RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 CCT6BQ92526 530 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 KLHL29Q96CT2 875 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 SUDS3Q9H7L9 328 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 H0Y3Z8 333 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 KLK7P49862 253 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 MMGT1Q8N4V1 131 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 DENND2AQ9ULE3 1009 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 MAST3O60307 1309 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 STXBP3O00186 592 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 FESP07332 822 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 NR5A1Q13285 461 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ZNF174Q15697 407 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 DBN1Q16643 649 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 ABL2P42684 1182 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 DPYDQ12882 1025 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM14Q14142 442 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 PAGR1Q9BTK6 254 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 ANGEL1Q9UNK9 670 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 CUL3Q13618 768 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 GCKRQ14397 625 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 RNF220Q5VTB9 566 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 UHMK1Q8TAS1 419 aaKnown RBP13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 FAM81AQ8TBF8 368 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 C3P01024 1663 aa13.15□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 CLSTN1O94985 981 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 ALDH5A1P51649 535 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 SESN3P58005 492 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 BLMHQ13867 455 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 FAM170AA1A519 330 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 MAP3K13O43283 966 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 PPIP5K2O43314 1243 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 MARCH6O60337 910 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 ATP11AP98196 1134 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 CUL4BQ13620 913 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 CDC37Q16543 378 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 MFN1Q8IWA4 741 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 SLC5A4Q9NY91 659 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 MYH8P13535 1937 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 ACTN4O43707 911 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 RNF8O76064 485 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 ARID5AQ03989 594 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 CACNA2D4Q7Z3S7 1137 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 USH1CQ9Y6N9 552 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 TMEM131LA2VDJ0 1609 aa13.14□□□□□ -0.31
RBFOX1-208ENST00000547372 M0R2C6 588 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 SEMA3EO15041 775 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 HIP1RO75146 1068 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 PTPREP23469 700 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 TUBP50607 506 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 C2CD5Q86YS7 1000 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 LMNTD2Q8IXW0 634 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 CASKIN2Q8WXE0 1202 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 LUC7L3O95232 432 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-208ENST00000547372 FTCDO95954 541 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms