RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
GCN1-202ENST00000547263 PURBQ96QR8 312 aaKnown RBP12.7□□□□□ -0.38
GCN1-202ENST00000547263 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
GCN1-202ENST00000547263 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
GCN1-202ENST00000547263 FRMPD4Q14CM0 1322 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 AKR1A1P14550 325 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 CPA1P15085 419 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 USH1GQ495M9 461 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
GCN1-202ENST00000547263 TAPT1Q6NXT6 567 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 RUFY3Q7L099 469 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
GCN1-202ENST00000547263 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
GCN1-202ENST00000547263 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
GCN1-202ENST00000547263 RBM28Q9NW13 759 aaKnown RBP12.69□□□□□ -0.38
GCN1-202ENST00000547263 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
GCN1-202ENST00000547263 DNM1LO00429 736 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 CTAGE5O15320 804 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 SEC24BO95487 1268 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 RXRAP19793 462 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 TOB2Q14106 344 aaPredicted RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 Q6ZUG5 572 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 KLHDC9Q8NEP7 349 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 GNEQ9Y223 722 aaKnown RBP12.68□□□□□ -0.38
GCN1-202ENST00000547263 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 PCDHA1Q9Y5I3 950 aa12.68□□□□□ -0.38
GCN1-202ENST00000547263 KLF18A0A0U1RQI7 1052 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 ZBTB43O43298 467 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 DUSP11O75319 330 aaKnown RBP12.67□□□□□ -0.38
GCN1-202ENST00000547263 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
GCN1-202ENST00000547263 CDC27P30260 824 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 NTRK3Q16288 839 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 MICU3Q86XE3 530 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 PAWRQ96IZ0 340 aaKnown RBP12.67□□□□□ -0.38
GCN1-202ENST00000547263 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
GCN1-202ENST00000547263 PTPDC1A2A3K4 754 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 GJA9P57773 515 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 SNX17Q15036 470 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 LRRC41Q15345 812 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 RTN1Q16799 776 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 ARRDC4Q8NCT1 418 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 BRF1Q92994 677 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
GCN1-202ENST00000547263 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 Q9Y3F1 56 aa12.66□□□□□ -0.38
GCN1-202ENST00000547263 DDX49Q9Y6V7 483 aaKnown RBP12.66□□□□□ -0.38
GCN1-202ENST00000547263 SYNRGQ9UMZ2 1314 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 MEIS2O14770 477 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 RARBP10826 455 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 CALML3P27482 149 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 CNGA1P29973 690 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 C1orf53Q5VUE5 145 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 IQSEC1Q6DN90 963 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 ZHX1Q9UKY1 873 aaPredicted RBP12.65□□□□□ -0.38
GCN1-202ENST00000547263 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
GCN1-202ENST00000547263 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
GCN1-202ENST00000547263 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
GCN1-202ENST00000547263 DUSP28Q4G0W2 176 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
GCN1-202ENST00000547263 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
GCN1-202ENST00000547263 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
GCN1-202ENST00000547263 PDCD2LQ9BRP1 358 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 HTATIP2Q9BUP3 242 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms