RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
LINC00661-202ENST00000547102 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
LINC00661-202ENST00000547102 RBM8AQ9Y5S9 174 aaKnown RBP12.47□□□□□ -0.41
LINC00661-202ENST00000547102 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
LINC00661-202ENST00000547102 E7EWF7 191 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 CABYRO75952 493 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 SMPD1P17405 629 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 TMEM67Q5HYA8 995 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 CCSAPQ6IQ19 270 aaPredicted RBP12.46□□□□□ -0.41
LINC00661-202ENST00000547102 ANKRD33Q7Z3H0 272 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 CATIPQ7Z7H3 387 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 FBXO11Q86XK2 927 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 TOX2Q96NM4 488 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.41
LINC00661-202ENST00000547102 Q9Y3F1 56 aa12.46□□□□□ -0.41
LINC00661-202ENST00000547102 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 SOX1O00570 391 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-202ENST00000547102 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-202ENST00000547102 RAG1P15918 1043 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 NKX3-2P78367 333 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 BEX3Q00994 111 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 TRAF1Q13077 416 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 GRM4Q14833 912 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 LRIT3Q3SXY7 679 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 DUSP28Q4G0W2 176 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
LINC00661-202ENST00000547102 BMP2KLQ5H9B9 411 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 BADQ92934 168 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 AMNQ9BXJ7 453 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 WDR11Q9BZH6 1224 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 PDGFCQ9NRA1 345 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 TMEM39AQ9NV64 488 aa12.45□□□□□ -0.42
LINC00661-202ENST00000547102 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 ZBTB5O15062 677 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 NKRFO15226 690 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 TLR3O15455 904 aaKnown RBP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 CXCL17Q6UXB2 119 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 SH3RF1Q7Z6J0 888 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
LINC00661-202ENST00000547102 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 MAD2L2Q9UI95 211 aa12.44□□□□□ -0.42
LINC00661-202ENST00000547102 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-202ENST00000547102 ARVCFO00192 962 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 CTAGE5O15320 804 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 EDNRBP24530 442 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 CPT1AP50416 773 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 TTLL4Q14679 1199 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 GPR153Q6NV75 609 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 SYTL5Q8TDW5 730 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-202ENST00000547102 CCDC136Q96JN2 1154 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 MTA3Q9BTC8 594 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 SEZ6LQ9BYH1 1024 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 LSG1Q9H089 658 aaKnown RBP12.43□□□□□ -0.42
LINC00661-202ENST00000547102 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-202ENST00000547102 TAF6LQ9Y6J9 622 aa12.43□□□□□ -0.42
LINC00661-202ENST00000547102 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 RBM47A0AV96 593 aaKnown RBP12.42□□□□□ -0.42
LINC00661-202ENST00000547102 DDAH1O94760 285 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 CFBP00751 764 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 KIF5BP33176 963 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 MCM5P33992 734 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 ANTXR2P58335 489 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 FPGSQ05932 587 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-202ENST00000547102 IWS1Q96ST2 819 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 PCDHA1Q9Y5I3 950 aa12.42□□□□□ -0.42
LINC00661-202ENST00000547102 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 SLC27A2O14975 620 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 PRC1O43663 620 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 CDC45O75419 566 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 NEFLP07196 543 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 MYL3P08590 195 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
LINC00661-202ENST00000547102 EIF2AK2P19525 551 aaKnown RBP12.41□□□□□ -0.42
LINC00661-202ENST00000547102 PTGS1P23219 599 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 CDK7P50613 346 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms