RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 IGHMBP2P38935 993 aaKnown RBP8.39□□□□□ -1.07
CCDC60-205ENST00000546345 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
CCDC60-205ENST00000546345 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
CCDC60-205ENST00000546345 C9orf50Q5SZB4 431 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 MAP3K21Q5TCX8 1036 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 TRIB2Q92519 343 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 IVNS1ABPQ9Y6Y0 642 aa8.39□□□□□ -1.07
CCDC60-205ENST00000546345 FOCADQ5VW36 1801 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 KCNJ4P48050 445 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
CCDC60-205ENST00000546345 UBE3BQ7Z3V4 1068 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 ZNF804AQ7Z570 1209 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 PLA2G12BQ9BX93 195 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
CCDC60-205ENST00000546345 A0A0G2JLL6 359 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-205ENST00000546345 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 PDGFAP04085 211 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 CSF1RP07333 972 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 RARAP10276 462 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 EPXP11678 715 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 ALAS2P22557 587 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 TNNI2P48788 182 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 SHHQ15465 462 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 TRIP4Q15650 581 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-205ENST00000546345 ECM1Q16610 540 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 PRRT2Q7Z6L0 340 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-205ENST00000546345 FAM83AQ86UY5 434 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
CCDC60-205ENST00000546345 TNFRSF25Q93038 417 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 ZNF341Q9BYN7 854 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 IGFLR1Q9H665 355 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 ZNF236Q9UL36 1845 aa8.37□□□□□ -1.07
CCDC60-205ENST00000546345 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 BRWD1Q9NSI6 2320 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 FZD6O60353 706 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 MAP3K6O95382 1288 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 USP5P45974 858 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 MPHOSPH8Q99549 860 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 GJD2Q9UKL4 321 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 SMCHD1A6NHR9 2005 aa8.36□□□□□ -1.07
CCDC60-205ENST00000546345 CACNA1AO00555 2505 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ZNF318Q5VUA4 2279 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ELOA3DA6NLF2 546 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 GYG1P46976 350 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ARHGAP4P98171 946 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 TBC1D8BQ0IIM8 1120 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 LMOD3Q0VAK6 560 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 FAM110CQ1W6H9 321 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ELOA3BQ3SY89 546 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 FKBP1CQ5VVH2 108 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 DCAF15Q66K64 600 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 APOBEC3HQ6NTF7 200 aaKnown RBP8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ANKRD13CQ8N6S4 541 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 SNX27Q96L92 541 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-205ENST00000546345 BRPF3Q9ULD4 1205 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 SLC45A1Q9Y2W3 748 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
CCDC60-205ENST00000546345 PARP14Q460N5 1801 aa8.35□□□□□ -1.07
CCDC60-205ENST00000546345 A0A0G2JMZ2 1700 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 PI4KAP2A4QPH2 592 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 PHF20L1A8MW92 1017 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 CXCL11O14625 94 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 ANP32CO43423 234 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 AMPD1P23109 780 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 PCSK7Q16549 785 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 PDE12Q6L8Q7 609 aaKnown RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 PI4KAP1Q8N8J0 262 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 BTBD6Q96KE9 485 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 ZDHHC15Q96MV8 337 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 NECAB3Q96P71 396 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 STK17AQ9UEE5 414 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 DAGLAQ9Y4D2 1042 aa8.34□□□□□ -1.07
CCDC60-205ENST00000546345 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.07
CCDC60-205ENST00000546345 MMP20O60882 483 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 PSAPP07602 524 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 CCND3P30281 292 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 ADH7P40394 386 aa8.33□□□□□ -1.08
CCDC60-205ENST00000546345 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
CCDC60-205ENST00000546345 EHHADHQ08426 723 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms